RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	SMIM24	O75264	130 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	SRP72	O76094	671 aa	Known RBP	13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	C1R	P00736	705 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	ACVRL1	P37023	503 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	MLLT6	P55198	1093 aa	Predicted RBP	13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	POLE2	P56282	527 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	SLC10A7	Q0GE19	358 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	ALF	Q53S48	1182 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	TXNDC8	Q6A555	127 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	GLT6D1	Q7Z4J2	308 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	GANC	Q8TET4	914 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	MTMR10	Q9NXD2	777 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	UTP6	Q9NYH9	597 aa	Known RBP	13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	HACD3	Q9P035	362 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	LGALS13	Q9UHV8	139 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	SCML2	Q9UQR0	700 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	TEX264	Q9Y6I9	313 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	MATN3	O15232	486 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	ACSL4	O60488	711 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	CCNC	P24863	283 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	DSC3	Q14574	896 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	PABPC1L	Q4VXU2	614 aa	Known RBP	13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	ESRP1	Q6NXG1	681 aa	Known RBP	13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	ELMSAN1	Q6PJG2	1045 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	SLC39A5	Q6ZMH5	540 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	HDAC10	Q969S8	669 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	GBP5	Q96PP8	586 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	OMD	Q99983	421 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	FAM167B	Q9BTA0	163 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	EMILIN2	Q9BXX0	1053 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	TXLNGY	Q9BZA5	131 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	C2orf71	A6NGG8	1288 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	HLA-DQB2	P05538	268 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	MBTPS1	Q14703	1052 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	FAM83E	Q2M2I3	478 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	ACAD11	Q709F0	780 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	DDIAS	Q8IXT1	998 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	TSPAN17	Q96FV3	270 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	C11orf49	Q9H6J7	331 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	CFAP97	Q9P2B7	532 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	YIPF1	Q9Y548	306 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	FAM95C	A0A1B0GW59	222 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	TOP3B	O95985	862 aa	Known RBP	13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	FGB	P02675	491 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	WDR4	P57081	412 aa	Known RBP	13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	BST1	Q10588	318 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	ITIH4	Q14624	930 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	PAFAH1B3	Q15102	231 aa	Known RBP	13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	DLG2	Q15700	870 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	PDK4	Q16654	411 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	PTRHD1	Q6GMV3	140 aa	Known RBP	13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	FAM171B	Q6P995	826 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	CENPI	Q92674	756 aa	Predicted RBP	13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	C8orf48	Q96LL4	319 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	TMEM237	Q96Q45	408 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	IGFLR1	Q9H665	355 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	ASAH2	Q9NR71	780 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	SNX15	Q9NRS6	342 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	CPQ	Q9Y646	472 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	FAM237B	A0A1B0GVD1	139 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	SUPT3H	B4E1H0	165 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	SUPT3H	O75486	399 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	GJB5	O95377	273 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	PPARG	P37231	505 aa	Predicted RBP	13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	MPP2	Q14168	576 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	KIF19	Q2TAC6	998 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	POM121L1P	Q3SYA9	428 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	C7orf61	Q8IZ16	206 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	WDR6	Q9NNW5	1121 aa	Known RBP	13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	LATS2	Q9NRM7	1088 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	FAM50B	Q9Y247	325 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	SUPT7L	O94864	414 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	CBX6	O95503	412 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	CYP11A1	P05108	521 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	ADH1A	P07327	375 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	CTPS1	P17812	591 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	FOXN2	P32314	431 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	WASHC5	Q12768	1159 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	SMARCB1	Q12824	385 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	MS4A13	Q5J8X5	152 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	CNKSR3	Q6P9H4	555 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	SCD5	Q86SK9	330 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	FAM161B	Q96MY7	647 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	OSBPL2	Q9H1P3	480 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	PHF24	Q9UPV7	400 aa		13.47	□□□□□ -0.25
NRXN1-233	ENST00000630543	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	LYPLA1	O75608	230 aa	Predicted RBP	13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	TSHR	P16473	764 aa		13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	AKT1	P31749	480 aa		13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	PPM1A	P35813	382 aa		13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	STX1B	P61266	288 aa		13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	MPP1	Q00013	466 aa		13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	RETSAT	Q6NUM9	610 aa		13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	TMEM173	Q86WV6	379 aa	Predicted RBP	13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	CACUL1	Q86Y37	369 aa		13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	KCTD4	Q8WVF5	259 aa		13.46	□□□□□ -0.25
NRXN1-233	ENST00000630543	IGSF21	Q96ID5	467 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms