RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 TEX26Q8N6G2 289 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 OR2A12Q8NGT7 310 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 CCDC26Q8TAB7 109 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 SLC35B2Q8TB61 432 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 VOPP1Q96AW1 172 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 ZNF599Q96NL3 588 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 FAM129BQ96TA1 746 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 CINPQ9BW66 212 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 AP1M1Q9BXS5 423 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 CEP44Q9C0F1 390 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 SUN2Q9UH99 717 aa11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 EVLQ9UI08 416 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-221ENST00000621093 PLXND1Q9Y4D7 1925 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 LRRK1Q38SD2 2015 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 CXorf51AA0A1B0GTR3 108 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 TARSL2A2RTX5 802 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 PRR33A8MZF0 331 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 HACD1B0YJ81 288 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 K7ESF4 209 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 CES2O00748 559 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 MCF2LO15068 1137 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 LIASO43766 372 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 SYNCRIPO60506 623 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 CTSLP07711 333 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 PRLRP16471 622 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 GABRG2P18507 467 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 PTPN3P26045 913 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 MAGEA9P43362 315 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 MMP13P45452 471 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 CXCL12P48061 93 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 CCNHP51946 323 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 METAP1P53582 386 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 GDF10P55107 478 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 IFI35P80217 286 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 WASHC5Q12768 1159 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 HNRNPDQ14103 355 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 ZNF235Q14590 738 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 IHHQ14623 411 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 STARD3Q14849 445 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 POM121L1PQ3SYA9 428 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 MARC1Q5VT66 337 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 BZW1Q7L1Q6 419 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 PRUNE1Q86TP1 453 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 CREG2Q8IUH2 290 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 RYBPQ8N488 228 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 PCDH20Q8N6Y1 951 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 CNTD1Q8N815 330 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 PRELID2Q8N945 189 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 TTC13Q8NBP0 860 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 OR2AP1Q8NGE2 309 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 ACTRT1Q8TDG2 376 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 NSMCE1Q8WV22 266 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 HMGB4Q8WW32 186 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 CASKIN2Q8WXE0 1202 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 ISG20Q96AZ6 181 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 IL12RB2Q99665 862 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 LRFN3Q9BTN0 628 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 MKRN2Q9H000 416 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 ZDHHC6Q9H6R6 413 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 USP29Q9HBJ7 922 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 CD93Q9NPY3 652 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 RBM22Q9NW64 420 aaKnown RBP eCLIP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 SEPT3Q9UH03 358 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 SARDHQ9UL12 918 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 TTC7AQ9ULT0 858 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 SLC8A2Q9UPR5 921 aa11.1□□□□□ -0.63
POLR2J3-221ENST00000621093 MYLKQ15746 1914 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 DOCK9Q9BZ29 2069 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 BCLAF3A2AJT9 711 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 F5H423 210 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 PGRMC1O00264 195 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 PLK4O00444 970 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 KCNN4O15554 427 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 ZBTB24O43167 697 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 IGSF6O95976 241 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 GSRP00390 522 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 NDUFV2P19404 249 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 KCNJ1P48048 391 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 PSMD8P48556 350 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 RENBPP51606 427 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 CCR3P51677 355 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 RPS14P62263 151 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 SNRPD1P62314 119 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 DSC2Q02487 901 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 ITKQ08881 620 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 NIPAL4Q0D2K0 466 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 RFTN1Q14699 578 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 E2F5Q15329 346 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 OASLQ15646 514 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 HEATR6Q6AI08 1181 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 ANO7Q6IWH7 933 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 TTC27Q6P3X3 843 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 SRLQ86TD4 932 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 TMPRSS6Q8IU80 811 aa11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 MMAAQ8IVH4 418 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 CDKL3Q8IVW4 592 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-221ENST00000621093 ZNF567Q8N184 647 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms