RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 GDF10P55107 478 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 WASHC5Q12768 1159 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 POM121L1PQ3SYA9 428 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 KCNV2Q8TDN2 545 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 TFB1MQ8WVM0 346 aaKnown RBP13.86□□□□□ -0.19
NEK3-210ENST00000620675 MAML1Q92585 1016 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 FAM129BQ96TA1 746 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 TMEM121Q9BTD3 319 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 NT5MQ9NPB1 228 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 BPTFQ12830 3046 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 ZSCAN5CA6NGD5 496 aaPredicted RBP13.86□□□□□ -0.19
NEK3-210ENST00000620675 PPP1R12AO14974 1030 aaPredicted RBP13.86□□□□□ -0.19
NEK3-210ENST00000620675 TCP1P17987 556 aaKnown RBP13.86□□□□□ -0.19
NEK3-210ENST00000620675 PTPN3P26045 913 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 VASPP50552 380 aaPredicted RBP13.86□□□□□ -0.19
NEK3-210ENST00000620675 COPAP53621 1224 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 RHOAP61586 193 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 SLC20A2Q08357 652 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 DMWDQ09019 674 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 INO80DQ53TQ3 878 aaPredicted RBP13.86□□□□□ -0.19
NEK3-210ENST00000620675 SLC45A4Q5BKX6 768 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 TMCO4Q5TGY1 634 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 SYT13Q7L8C5 426 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 MAML2Q8IZL2 1156 aaPredicted RBP13.86□□□□□ -0.19
NEK3-210ENST00000620675 SPEM1Q8N4L4 309 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 GLIS1Q8NBF1 620 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 ACTRT1Q8TDG2 376 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 USP29Q9HBJ7 922 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 SARDHQ9UL12 918 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 TTC7AQ9ULT0 858 aaPredicted RBP13.86□□□□□ -0.19
NEK3-210ENST00000620675 TTLL3Q9Y4R7 772 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 PGRMC1O00264 195 aaKnown RBP13.85□□□□□ -0.19
NEK3-210ENST00000620675 MCF2LO15068 1137 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 LIASO43766 372 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 PRLRP16471 622 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 AVPR2P30518 371 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 NNMTP40261 264 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 MMP13P45452 471 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 CCNHP51946 323 aaPredicted RBP13.85□□□□□ -0.19
NEK3-210ENST00000620675 CAMK2GQ13555 558 aaPredicted RBP13.85□□□□□ -0.19
NEK3-210ENST00000620675 OASLQ15646 514 aaKnown RBP13.85□□□□□ -0.19
NEK3-210ENST00000620675 TMEM31Q5JXX7 168 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 MARC1Q5VT66 337 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 TTC27Q6P3X3 843 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 TEX26Q8N6G2 289 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 KDM1BQ8NB78 822 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 AGAP3Q96P47 875 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 IL12RB2Q99665 862 aa13.85□□□□□ -0.19
NEK3-210ENST00000620675 RBM22Q9NW64 420 aaKnown RBP eCLIP13.85□□□□□ -0.19
NEK3-210ENST00000620675 SPATA6Q9NWH7 488 aaPredicted RBP13.85□□□□□ -0.19
NEK3-210ENST00000620675 EVLQ9UI08 416 aaPredicted RBP13.85□□□□□ -0.19
NEK3-210ENST00000620675 EDDM13A0A1B0GTR0 161 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 TCRBV21S2A2A0A5A6 115 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 PLK4O00444 970 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 DLL1O00548 723 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 ETS1P14921 441 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 EOGTQ5NDL2 527 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 DARS2Q6PI48 645 aaKnown RBP13.84□□□□□ -0.19
NEK3-210ENST00000620675 LRRC49Q8IUZ0 686 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 GRIN3AQ8TCU5 1115 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 ZNF599Q96NL3 588 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 PSKH2Q96QS6 385 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 CINPQ9BW66 212 aaPredicted RBP13.84□□□□□ -0.19
NEK3-210ENST00000620675 TRPM6Q9BX84 2022 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 K7ESF4 209 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 CES2O00748 559 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 KCNN4O15554 427 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 GPR37L1O60883 481 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 GABRG2P18507 467 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 NDUFV2P19404 249 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 CD68P34810 354 aaPredicted RBP13.84□□□□□ -0.19
NEK3-210ENST00000620675 IFI35P80217 286 aaPredicted RBP13.84□□□□□ -0.19
NEK3-210ENST00000620675 DSC2Q02487 901 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 NIPAL4Q0D2K0 466 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 XRCC4Q13426 336 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 HNRNPDQ14103 355 aaKnown RBP13.84□□□□□ -0.19
NEK3-210ENST00000620675 ZNF235Q14590 738 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 CARD16Q5EG05 197 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 SDE2Q6IQ49 451 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 ANO7Q6IWH7 933 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 BZW1Q7L1Q6 419 aaKnown RBP13.84□□□□□ -0.19
NEK3-210ENST00000620675 TRMT11Q7Z4G4 463 aaKnown RBP13.84□□□□□ -0.19
NEK3-210ENST00000620675 MMAAQ8IVH4 418 aaKnown RBP13.84□□□□□ -0.19
NEK3-210ENST00000620675 ZNF567Q8N184 647 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 PCDH20Q8N6Y1 951 aaKnown RBP13.84□□□□□ -0.19
NEK3-210ENST00000620675 FAM71DQ8N9W8 422 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 DTWD2Q8NBA8 298 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 MDGA1Q8NFP4 955 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 OR2AP1Q8NGE2 309 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 HMGB4Q8WW32 186 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 HTR3CQ8WXA8 447 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 CEP44Q9C0F1 390 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 WASF2Q9Y6W5 498 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 MYLKQ15746 1914 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 THADAQ6YHU6 1953 aa13.84□□□□□ -0.19
NEK3-210ENST00000620675 FANCMQ8IYD8 2048 aa13.83□□□□□ -0.19
NEK3-210ENST00000620675 NPC1O15118 1278 aa13.83□□□□□ -0.2
NEK3-210ENST00000620675 ZBTB24O43167 697 aaPredicted RBP13.83□□□□□ -0.2
NEK3-210ENST00000620675 SYNCRIPO60506 623 aaKnown RBP13.83□□□□□ -0.2
NEK3-210ENST00000620675 PIGNO95427 931 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms