RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 NRBF2Q96F24 287 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 DNAJC1Q96KC8 554 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 SEPT5Q99719 369 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 RNF39Q9H2S5 420 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 KCNK13Q9HB14 408 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 CD274Q9NZQ7 290 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 KANSL3Q9P2N6 904 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 VTI1BQ9UEU0 232 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 EGFL7Q9UHF1 273 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 SFMBT1Q9UHJ3 866 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 PSMD13Q9UNM6 376 aa6.96□□□□□ -1.3
SYNPO2-206ENST00000610556 TMEM233B4DJY2 109 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 KLF11O14901 512 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 MSI1O43347 362 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RBP1P09455 135 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 XRCC1P18887 633 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PSMA4P25789 261 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 MAP4P27816 1152 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RPL5P46777 297 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 OR1G1P47890 313 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 HSPA13P48723 471 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 LHX1P48742 406 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 KCNK10P57789 538 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RAB10P61026 200 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 NFYCQ13952 458 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PITRM1Q5JRX3 1037 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PCID2Q5JVF3 399 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 MARC1Q5VT66 337 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 SDHAF4Q5VUM1 108 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CDCA2Q69YH5 1023 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 SLC9A4Q6AI14 798 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 GRAMD4Q6IC98 578 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ZFP1Q6P2D0 407 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CLVS1Q8IUQ0 354 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 MYO1HQ8N1T3 1032 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 FSTL5Q8N475 847 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RP9Q8TA86 221 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ULK4Q96C45 1275 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 KLHL5Q96PQ7 755 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CIB1Q99828 191 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RTKNQ9BST9 563 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 COLEC11Q9BWP8 271 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 STN1Q9H668 368 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 VTA1Q9NP79 307 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PKD2L2Q9NZM6 624 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 GNEQ9Y223 722 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM50BQ9Y247 325 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PCDHB12Q9Y5F1 795 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 GOLGA4Q13439 2230 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 TNRC6CQ9HCJ0 1690 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 STRNO43815 780 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 LRIG2O94898 1065 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 AP2A1O95782 977 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 FESP07332 822 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 SMIM10L2AP0DMW4 78 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 SMIM10L2BP0DMW5 78 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ITGAXP20702 1163 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CRABP2P29373 138 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 THPOP40225 353 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RAP1GDS1P52306 607 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 THOP1P52888 689 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PFKFB4Q16877 469 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 IMPG1Q17R60 797 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 MGAT5BQ3V5L5 792 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 MBLAC2Q68D91 279 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 KIAA1841Q6NSI8 718 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 DDI1Q8WTU0 396 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 DTNBP1Q96EV8 351 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RMND5BQ96G75 393 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ZMAT2Q96NC0 199 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ZBTB18Q99592 522 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ABHD16BQ9H3Z7 469 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RHOJQ9H4E5 214 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RGS18Q9NS28 235 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PIGVQ9NUD9 493 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 GID8Q9NWU2 228 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ETAA1Q9NY74 926 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RBPJLQ9UBG7 517 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ADAM28Q9UKQ2 775 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PPP2R3BQ9Y5P8 575 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 MYBPHLA2RUH7 354 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 TNPO2O14787 897 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 FGF3P11487 239 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ODC1P11926 461 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CYP3A5P20815 502 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CHRNA4P43681 627 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 SLC7A2P52569 658 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 MFSD10Q14728 455 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PCLAFQ15004 111 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 INSCQ1MX18 579 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CNPY1Q3B7I2 92 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ZRANB3Q5FWF4 1079 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 MTX3Q5HYI7 312 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RPS27LQ71UM5 84 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 GPR141Q7Z602 305 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 GALNT15Q8N3T1 639 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 UBR7Q8N806 425 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PCDHAC1Q9H158 963 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 DMAP1Q9NPF5 467 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms