RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ARSIQ5FYB1 569 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 KIAA0895LQ68EN5 471 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 SLC23A3Q6PIS1 610 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 NCEH1Q6PIU2 408 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 RABEPKQ7Z6M1 372 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 TMTC1Q8IUR5 882 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 ARHGAP12Q8IWW6 846 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 PLPP6Q8IY26 295 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 RYBPQ8N488 228 aaPredicted RBP14.1□□□□□ -0.15
UPF1-205ENST00000598209 LZTR1Q8N653 840 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 OR14C36Q8NHC7 312 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 CEP76Q8TAP6 659 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 GRIN3AQ8TCU5 1115 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 CASKIN2Q8WXE0 1202 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 TSC1Q92574 1164 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 FAM131CQ96AQ9 280 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 HEPHQ9BQS7 1158 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 NUSAP1Q9BXS6 441 aaKnown RBP14.1□□□□□ -0.15
UPF1-205ENST00000598209 MIR1-1HGQ9H1L0 117 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 PDFQ9HBH1 243 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 ETNK2Q9NVF9 386 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 HECAQ9UBI9 543 aaPredicted RBP14.1□□□□□ -0.15
UPF1-205ENST00000598209 UBA2Q9UBT2 640 aaPredicted RBP14.1□□□□□ -0.15
UPF1-205ENST00000598209 SUSD2Q9UGT4 822 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 EIF2B4Q9UI10 523 aaKnown RBP14.1□□□□□ -0.15
UPF1-205ENST00000598209 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.1□□□□□ -0.15
UPF1-205ENST00000598209 MFHAS1Q9Y4C4 1052 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 PCDHA13Q9Y5I0 950 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 WASF2Q9Y6W5 498 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 CACNA1EQ15878 2313 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 CEP250Q9BV73 2442 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 LNP1A1A4G5 178 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 J3KR12 359 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 RNF103O00237 685 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 DFFAO00273 331 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 SLC7A4O43246 635 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 PRAMEF11O60813 436 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 LEFTY1O75610 366 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 FSBPO95073 299 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 KRT7P08729 469 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 CD48P09326 243 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 GNSP15586 552 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 ARSEP51690 589 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 MMRN1Q13201 1228 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 TCEAL1Q15170 157 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 AGBL4Q5VU57 503 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 TMCO3Q6UWJ1 677 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 TP53INP2Q8IXH6 220 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 ZCCHC9Q8N567 271 aaKnown RBP14.09□□□□□ -0.15
UPF1-205ENST00000598209 SPC24Q8NBT2 197 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 OR2AP1Q8NGE2 309 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 OR2T34Q8NGX1 318 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 OR6K2Q8NGY2 324 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 FAM71BQ8TC56 605 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 NETO1Q8TDF5 533 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 ARRDC3Q96B67 414 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 BIRC7Q96CA5 298 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 RMDN1Q96DB5 314 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 EDEM2Q9BV94 578 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 ZDHHC6Q9H6R6 413 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 DYRK4Q9NR20 520 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 KLHL11Q9NVR0 708 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 RCOR3Q9P2K3 495 aaPredicted RBP14.09□□□□□ -0.15
UPF1-205ENST00000598209 IMPACTQ9P2X3 320 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 CDV3Q9UKY7 258 aaKnown RBP14.09□□□□□ -0.15
UPF1-205ENST00000598209 SLC6A14Q9UN76 642 aa14.09□□□□□ -0.15
UPF1-205ENST00000598209 EPN1Q9Y6I3 576 aaPredicted RBP14.09□□□□□ -0.15
UPF1-205ENST00000598209 A0A1B0GTW7 788 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 PLRG1O43660 514 aaKnown RBP14.08□□□□□ -0.16
UPF1-205ENST00000598209 NDUFA10O95299 355 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 IGHV4-34P06331 123 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 SERPINF2P08697 491 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 IL4RP24394 825 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 GKP32189 559 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 NOP2P46087 812 aaKnown RBP14.08□□□□□ -0.16
UPF1-205ENST00000598209 RHOAP61586 193 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 DPYSL3Q14195 570 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 PDK2Q15119 407 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 CYTH1Q15438 398 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 ZFYVE27Q5T4F4 411 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 ATXN7L2Q5T6C5 722 aaPredicted RBP14.08□□□□□ -0.16
UPF1-205ENST00000598209 PIP5KL1Q5T9C9 394 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 ARHGAP36Q6ZRI8 547 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 KCTD6Q8NC69 237 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 PPP1R16AQ96I34 528 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 GDAP1L1Q96MZ0 367 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 CALN1Q9BXU9 219 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 KDM4CQ9H3R0 1056 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 SP110Q9HB58 689 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 CAPN10Q9HC96 672 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 LUC7LQ9NQ29 371 aaKnown RBP14.08□□□□□ -0.16
UPF1-205ENST00000598209 FSCN3Q9NQT6 498 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 LHX3Q9UBR4 397 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 TFR2Q9UP52 801 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 TRPM6Q9BX84 2022 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 DMXL1Q9Y485 3027 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 TMEM131Q92545 1883 aa14.08□□□□□ -0.16
UPF1-205ENST00000598209 TBC1D3DA0A087WVF3 549 aa14.07□□□□□ -0.16
UPF1-205ENST00000598209 TBC1D3IA0A087WXS9 549 aa14.07□□□□□ -0.16
UPF1-205ENST00000598209 TBC1D3EA0A087X179 549 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms