RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 C5AR1P21730 350 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 CD6P30203 668 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 ID4P47928 161 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 CCNHP51946 323 aaPredicted RBP20■□□□□ 0.79
SHKBP1-214ENST00000597396 DPY19L3Q6ZPD9 716 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 RCOR2Q8IZ40 523 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 SUMF1Q8NBK3 374 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 CHST14Q8NCH0 376 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 PIP4K2CQ8TBX8 421 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 KRT35Q92764 455 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 RBM41Q96IZ5 413 aaKnown RBP20■□□□□ 0.79
SHKBP1-214ENST00000597396 OMDQ99983 421 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 DUSP15Q9H1R2 295 aaPredicted RBP20■□□□□ 0.79
SHKBP1-214ENST00000597396 FBXL12Q9NXK8 326 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 HECAQ9UBI9 543 aaPredicted RBP20■□□□□ 0.79
SHKBP1-214ENST00000597396 IL36AQ9UHA7 158 aa20■□□□□ 0.79
SHKBP1-214ENST00000597396 CCDC66A2RUB6 948 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 MAP3K6O95382 1288 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 IGSF6O95976 241 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 C7P10643 843 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 ZFXP17010 805 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 CTNNA2P26232 953 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 CTNNA1P35221 906 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 RPL6Q02878 288 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 PMS2CLQ68D20 193 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 LAIR1Q6GTX8 287 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 SPOCD1Q6ZMY3 1216 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 USP30Q70CQ3 517 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 LPCAT2Q7L5N7 544 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 NT5DC3Q86UY8 548 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 PLPP6Q8IY26 295 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 OR2AP1Q8NGE2 309 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 EXD1Q8NHP7 514 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 GRIN3AQ8TCU5 1115 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 NSMCE1Q8WV22 266 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 TOE1Q96GM8 510 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 ZC3H10Q96K80 434 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 GDAP1L1Q96MZ0 367 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 ZNF830Q96NB3 372 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 HEPHQ9BQS7 1158 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 ZDHHC6Q9H6R6 413 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 LZTFL1Q9NQ48 299 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 WSB2Q9NYS7 404 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 GMEB2Q9UKD1 530 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 PCDHA3Q9Y5H8 950 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 CAPN6Q9Y6Q1 641 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 GON4LQ3T8J9 2241 aa19.99■□□□□ 0.79
SHKBP1-214ENST00000597396 A0A1W2PP55 124 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 KPNA3O00505 521 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 RNASEH2AO75792 299 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 FTCDO95954 541 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 IGLV3-19P01714 112 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 CDKN2BP42772 138 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 DHPSP49366 369 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 DYNLT1P63172 113 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 FOXK2Q01167 660 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 RAD51Q06609 339 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 TFDP2Q14188 446 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 RFTN1Q14699 578 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 CYTH1Q15438 398 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 POM121L1PQ3SYA9 428 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 ARSIQ5FYB1 569 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 TFDP3Q5H9I0 405 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 ATXN7L2Q5T6C5 722 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 TMCO4Q5TGY1 634 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 KAZNQ674X7 775 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 LRRC49Q8IUZ0 686 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 HDDC3Q8N4P3 179 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 TMIEQ8NEW7 156 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 OR6K2Q8NGY2 324 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 ZNF599Q96NL3 588 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 CINPQ9BW66 212 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 GPR174Q9BXC1 333 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 DYRK4Q9NR20 520 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 NCDNQ9UBB6 729 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 LHX3Q9UBR4 397 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 SARDHQ9UL12 918 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 PPM1HQ9ULR3 514 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 PPP2R2CQ9Y2T4 447 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 HEY1Q9Y5J3 304 aa19.98■□□□□ 0.79
SHKBP1-214ENST00000597396 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 KRIT1O00522 736 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 CTSLP07711 333 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 MX2P20592 715 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 GARSP41250 739 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 RWDD2BP57060 319 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 GBE1Q04446 702 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 GALNT2Q10471 571 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 LBRQ14739 615 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 LLGL1Q15334 1064 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 SLC9A4Q6AI14 798 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 ZNF662Q6ZS27 426 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 TMEFF1Q8IYR6 380 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 KIAA2013Q8IYS2 634 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 BBS5Q8N3I7 341 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 DEFB119Q8N690 84 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 UBL4BQ8N7F7 174 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 PLD5Q8N7P1 536 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 RUBCNQ92622 972 aa19.97■□□□□ 0.79
SHKBP1-214ENST00000597396 EXOC2Q96KP1 924 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms