RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 CNTD1Q8N815 330 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 KDM1BQ8NB78 822 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 TFB1MQ8WVM0 346 aaKnown RBP15.76■□□□□ 0.11
SMCO4-206ENST00000596676 ZNF592Q92610 1267 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 MKRN2Q9H000 416 aaKnown RBP15.76■□□□□ 0.11
SMCO4-206ENST00000596676 RBM22Q9NW64 420 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMCO4-206ENST00000596676 SUN2Q9UH99 717 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 EVLQ9UI08 416 aaPredicted RBP15.76■□□□□ 0.11
SMCO4-206ENST00000596676 SARDHQ9UL12 918 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 SLC8A2Q9UPR5 921 aa15.76■□□□□ 0.11
SMCO4-206ENST00000596676 PRR33A8MZF0 331 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 PDE2AO00408 941 aaPredicted RBP15.75■□□□□ 0.11
SMCO4-206ENST00000596676 PLK4O00444 970 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 PPP1R12AO14974 1030 aaPredicted RBP15.75■□□□□ 0.11
SMCO4-206ENST00000596676 NPC1O15118 1278 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 SYNCRIPO60506 623 aaKnown RBP15.75■□□□□ 0.11
SMCO4-206ENST00000596676 ATG13O75143 517 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 HLA-DQB2P05538 268 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 GABRG2P18507 467 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 KCNJ1P48048 391 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 WASHC5Q12768 1159 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 HSF5Q4G112 596 aaPredicted RBP15.75■□□□□ 0.11
SMCO4-206ENST00000596676 SLC45A4Q5BKX6 768 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 MARC1Q5VT66 337 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 HEATR6Q6AI08 1181 aaKnown RBP15.75■□□□□ 0.11
SMCO4-206ENST00000596676 DARS2Q6PI48 645 aaKnown RBP15.75■□□□□ 0.11
SMCO4-206ENST00000596676 CREG2Q8IUH2 290 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 LRRC49Q8IUZ0 686 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 RYBPQ8N488 228 aaPredicted RBP15.75■□□□□ 0.11
SMCO4-206ENST00000596676 TEX26Q8N6G2 289 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 PCDH20Q8N6Y1 951 aaKnown RBP15.75■□□□□ 0.11
SMCO4-206ENST00000596676 PRELID2Q8N945 189 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 CCDC26Q8TAB7 109 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 SLC35B2Q8TB61 432 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 HMGB4Q8WW32 186 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 ZNF599Q96NL3 588 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 CINPQ9BW66 212 aaPredicted RBP15.75■□□□□ 0.11
SMCO4-206ENST00000596676 CEP44Q9C0F1 390 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 USP29Q9HBJ7 922 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 SAR1BQ9Y6B6 198 aa15.75■□□□□ 0.11
SMCO4-206ENST00000596676 TARSL2A2RTX5 802 aaKnown RBP15.74■□□□□ 0.11
SMCO4-206ENST00000596676 LIASO43766 372 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 TCP1P17987 556 aaKnown RBP15.74■□□□□ 0.11
SMCO4-206ENST00000596676 NDUFV2P19404 249 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 PTPN3P26045 913 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 MAGEA9P43362 315 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 MMP13P45452 471 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 CCNHP51946 323 aaPredicted RBP15.74■□□□□ 0.11
SMCO4-206ENST00000596676 GDF10P55107 478 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 GEMIN4P57678 1058 aaKnown RBP15.74■□□□□ 0.11
SMCO4-206ENST00000596676 RPS14P62263 151 aaKnown RBP15.74■□□□□ 0.11
SMCO4-206ENST00000596676 CSTF1Q05048 431 aaKnown RBP15.74■□□□□ 0.11
SMCO4-206ENST00000596676 NIPAL4Q0D2K0 466 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 XRCC4Q13426 336 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 ZNF235Q14590 738 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 STARD3Q14849 445 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 MYLK3Q32MK0 819 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 ARSIQ5FYB1 569 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 ANO7Q6IWH7 933 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 TIGD7Q6NT04 549 aaPredicted RBP15.74■□□□□ 0.11
SMCO4-206ENST00000596676 MMAAQ8IVH4 418 aaKnown RBP15.74■□□□□ 0.11
SMCO4-206ENST00000596676 C1orf210Q8IVY1 113 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 MDGA1Q8NFP4 955 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 TSTD1Q8NFU3 115 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 OR2AP1Q8NGE2 309 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 OR2T3Q8NH03 318 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 GRIN3AQ8TCU5 1115 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 ISG20Q96AZ6 181 aaKnown RBP15.74■□□□□ 0.11
SMCO4-206ENST00000596676 AGAP3Q96P47 875 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 IL12RB2Q99665 862 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 TMEM121Q9BTD3 319 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 TPSD1Q9BZJ3 242 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 SEPT3Q9UH03 358 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 INVSQ9Y283 1065 aa15.74■□□□□ 0.11
SMCO4-206ENST00000596676 PGRMC1O00264 195 aaKnown RBP15.73■□□□□ 0.11
SMCO4-206ENST00000596676 KRIT1O00522 736 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 MCF2LO15068 1137 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 KCNN4O15554 427 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 ZBTB24O43167 697 aaPredicted RBP15.73■□□□□ 0.11
SMCO4-206ENST00000596676 LAMTOR5O43504 91 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 PIGNO95427 931 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 TDGF1P13385 188 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 PRLRP16471 622 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 CHRNA3P32297 505 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 PSMD8P48556 350 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 SCNN1BP51168 640 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 CCR3P51677 355 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 DGKEP52429 567 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 IFI35P80217 286 aaPredicted RBP15.73■□□□□ 0.11
SMCO4-206ENST00000596676 DSC2Q02487 901 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 ITKQ08881 620 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 HNRNPDQ14103 355 aaKnown RBP15.73■□□□□ 0.11
SMCO4-206ENST00000596676 RFTN1Q14699 578 aaPredicted RBP15.73■□□□□ 0.11
SMCO4-206ENST00000596676 TTC27Q6P3X3 843 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 KIAA1324Q6UXG2 1013 aaKnown RBP15.73■□□□□ 0.11
SMCO4-206ENST00000596676 BZW1Q7L1Q6 419 aaKnown RBP15.73■□□□□ 0.11
SMCO4-206ENST00000596676 SRLQ86TD4 932 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 TMPRSS6Q8IU80 811 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 PGBD3Q8N328 593 aa15.73■□□□□ 0.11
SMCO4-206ENST00000596676 FRMD1Q8N878 549 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms