RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 GRIN3AQ8TCU5 1115 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 MRFAP1L1Q96HT8 127 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 CELF6Q96J87 481 aaKnown RBP14.2□□□□□ -0.14
CLIP3-205ENST00000592017 TM6SF2Q9BZW4 377 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 NOL6Q9H6R4 1146 aaKnown RBP14.2□□□□□ -0.14
CLIP3-205ENST00000592017 EBF2Q9HAK2 575 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 OSGEPQ9NPF4 335 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.2□□□□□ -0.14
CLIP3-205ENST00000592017 SARDHQ9UL12 918 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 FNDC3AQ9Y2H6 1198 aaKnown RBP14.2□□□□□ -0.14
CLIP3-205ENST00000592017 FRYQ5TBA9 3013 aa14.2□□□□□ -0.14
CLIP3-205ENST00000592017 WASH4PA8MWX3 477 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 EIF3CLB5ME19 914 aaKnown RBP14.19□□□□□ -0.14
CLIP3-205ENST00000592017 RASA4BC9J798 803 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 H3BRJ5 948 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 MCF2LO15068 1137 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 ALOX15BO15296 676 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 RASA4O43374 803 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 BUB1O43683 1085 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 SPINK2P20155 84 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 DRD3P35462 400 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 GEMIN4P57678 1058 aaKnown RBP14.19□□□□□ -0.14
CLIP3-205ENST00000592017 SIM1P81133 766 aaPredicted RBP14.19□□□□□ -0.14
CLIP3-205ENST00000592017 FAM46CQ5VWP2 391 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 TXNRD3NBQ6F5E7 133 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 CPNE8Q86YQ8 564 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 PSTKQ8IV42 348 aaKnown RBP14.19□□□□□ -0.14
CLIP3-205ENST00000592017 RYBPQ8N488 228 aaPredicted RBP14.19□□□□□ -0.14
CLIP3-205ENST00000592017 PCDH20Q8N6Y1 951 aaKnown RBP14.19□□□□□ -0.14
CLIP3-205ENST00000592017 CHST14Q8NCH0 376 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 OR2A12Q8NGT7 310 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 OR2T34Q8NGX1 318 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 PIP4K2CQ8TBX8 421 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 EIF3CQ99613 913 aaKnown RBP14.19□□□□□ -0.14
CLIP3-205ENST00000592017 GAREM1Q9H706 876 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 UVRAGQ9P2Y5 699 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 PPM1HQ9ULR3 514 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 FZD4Q9ULV1 537 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 SNX11Q9Y5W9 270 aa14.19□□□□□ -0.14
CLIP3-205ENST00000592017 MAP1BP46821 2468 aaKnown RBP14.19□□□□□ -0.14
CLIP3-205ENST00000592017 KPNA3O00505 521 aaPredicted RBP14.18□□□□□ -0.14
CLIP3-205ENST00000592017 KCNK3O14649 394 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 WNT9AO14904 365 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 KDELR3O43731 214 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 CTSLP07711 333 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 RARAP10276 462 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 ERCC2P18074 760 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 CHRNA3P32297 505 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 ARL4AP40617 200 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 ADPRHP54922 357 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 YBEYP58557 167 aaPredicted RBP14.18□□□□□ -0.14
CLIP3-205ENST00000592017 SLC25A11Q02978 314 aaKnown RBP14.18□□□□□ -0.14
CLIP3-205ENST00000592017 SLC20A2Q08357 652 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 KRT81Q14533 505 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 HADHQ16836 314 aaKnown RBP14.18□□□□□ -0.14
CLIP3-205ENST00000592017 PARP15Q460N3 678 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 BOLA3Q53S33 107 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.18□□□□□ -0.14
CLIP3-205ENST00000592017 DPY19L3Q6ZPD9 716 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 NETO2Q8NC67 525 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 OR6K2Q8NGY2 324 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 OR14C36Q8NHC7 312 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 SLC6A18Q96N87 628 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 CEP44Q9C0F1 390 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 KLC2Q9H0B6 622 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 DYRK4Q9NR20 520 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 KLHL11Q9NVR0 708 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 DONSONQ9NYP3 566 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 CWC15Q9P013 229 aaKnown RBP14.18□□□□□ -0.14
CLIP3-205ENST00000592017 IL36AQ9UHA7 158 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 ANKRD6Q9Y2G4 727 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 PCNX2A6NKB5 2137 aa14.18□□□□□ -0.14
CLIP3-205ENST00000592017 A0A1W2PPC4 97 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 ZSCAN5CA6NGD5 496 aaPredicted RBP14.17□□□□□ -0.14
CLIP3-205ENST00000592017 LRRC72A6NJI9 287 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 DFFAO00273 331 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 CBFA2T3O75081 653 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 TMCC1O94876 653 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 PROSCO94903 275 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 CD160O95971 181 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 GRIA4P48058 902 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 CCR5P51681 352 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 CCNHP51946 323 aaPredicted RBP14.17□□□□□ -0.14
CLIP3-205ENST00000592017 SERINC3Q13530 473 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 MESDQ14696 234 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 DPYSL2Q16555 572 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 ARSIQ5FYB1 569 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 ZFYVE27Q5T4F4 411 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 IL27RAQ6UWB1 636 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 NAXDQ8IW45 347 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 UMODL1-AS1Q8N2C9 162 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 NPWQ8N729 165 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 TEKT4Q8WW24 435 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 FAM131CQ96AQ9 280 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 ZDHHC6Q9H6R6 413 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 LRRC19Q9H756 370 aa14.17□□□□□ -0.14
CLIP3-205ENST00000592017 USP24Q9UPU5 2620 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 ARHGAP42A6NI28 874 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 RNF103O00237 685 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 ZNF821O75541 412 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms