RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 XPO7Q9UIA9 1087 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 TP53TG5Q9Y2B4 290 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 ABCA2Q9BZC7 2435 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 ALOX15BO15296 676 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 VPS4BO75351 444 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 MOCS3O95396 460 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 PAK4O96013 591 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 HLA-DRAP01903 254 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 RPN1P04843 607 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 CCL4P13236 92 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 PDGFRAP16234 1089 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 TSHRP16473 764 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 NOS2P35228 1153 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 RABIFP47224 123 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 GSK3AP49840 483 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 PFN3P60673 137 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 ADIGQ0VDE8 80 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 C16orf72Q14CZ0 275 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 STXBP4Q6ZWJ1 553 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 SV2AQ7L0J3 742 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 SLITRK4Q8IW52 837 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 UNC45BQ8IWX7 931 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 CCDC65Q8IXS2 484 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 SLC4A11Q8NBS3 891 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 GALNT11Q8NCW6 608 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 GLMNQ92990 594 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 TMEM159Q96B96 161 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 ALG14Q96F25 216 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 CLIC6Q96NY7 704 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 CATSPER2Q96P56 530 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 SLC17A9Q9BYT1 436 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 B3GNT4Q9C0J1 378 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 CYP3A43Q9HB55 503 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 SLC24A3Q9HC58 644 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 ABCC13Q9NSE7 274 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 SIRPGQ9P1W8 387 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 GULP1Q9UBP9 304 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 CCDC39Q9UFE4 941 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 APOBEC3BQ9UH17 382 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 FBXO2Q9UK22 296 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 VPS4AQ9UN37 437 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 NAALADL1Q9UQQ1 740 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 TNRC6AQ8NDV7 1962 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 CSMD2Q7Z408 3487 aa7.86□□□□□ -1.15
SMARCE1-217ENST00000580654 ESPL1Q14674 2120 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 NAV3Q8IVL0 2385 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 ZNF891A8MT65 544 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 STMND1H3BQB6 276 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 EXOC3O60645 756 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 PCDH8O95206 1070 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 ANXA6P08133 673 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 PRF1P14222 555 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 OAS2P29728 719 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 UGT1A3P35503 534 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 NNMTP40261 264 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 PLK1P53350 603 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 RAD23BP54727 409 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 TBX4P57082 545 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 DAOAP59103 153 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 SNRPFP62306 86 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 DLG2Q15700 870 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 ACCSLQ4AC99 568 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 ARHGAP17Q68EM7 881 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 CXorf57Q6NSI4 855 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 ESRP1Q6NXG1 681 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 PHACTR4Q8IZ21 702 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 LGI2Q8N0V4 545 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 ARL10Q8N8L6 244 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 ANKRD52Q8NB46 1076 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 OR52K2Q8NGK3 314 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 BTN2A2Q8WVV5 523 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 ERCC4Q92889 916 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 SLC39A13Q96H72 371 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 TBATAQ96M53 351 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 HEXIM2Q96MH2 286 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 PANK2Q9BZ23 570 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 CDH19Q9H159 772 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 SEMA6CQ9H3T2 930 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 IPO11Q9UI26 975 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 RNF215Q9Y6U7 377 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 HIVEP3Q5T1R4 2406 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 AKAP9Q99996 3911 aa7.85□□□□□ -1.15
SMARCE1-217ENST00000580654 TYW5A2RUC4 315 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 KPNA3O00505 521 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 XPO1O14980 1071 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 BNIP3LO60238 219 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 DDAH2O95865 285 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 BMP15O95972 392 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 FYNP06241 537 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 PRKAR1AP10644 381 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 ZNF18P17022 549 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 TRIM21P19474 475 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 CHRNA3P32297 505 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 PIK3CAP42336 1068 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 ATP1A2P50993 1020 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 SULT2A1Q06520 285 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 CDC20Q12834 499 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 SLC12A1Q13621 1099 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 MSS51Q4VC12 460 aa7.84□□□□□ -1.15
SMARCE1-217ENST00000580654 EFHC2Q5JST6 749 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms