RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 HECAQ9UBI9 543 aaPredicted RBP15.82■□□□□ 0.12
SLC6A4-205ENST00000579221 H7C0C1 242 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 IGSF6O95976 241 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 DNTTP04053 509 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 PRNPP04156 253 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 ATP1A1P05023 1023 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 TDGF1P13385 188 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 CCNB1P14635 433 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 NDUFV2P19404 249 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 CXCR5P32302 372 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 HSPA9P38646 679 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 ATP5OP48047 213 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 CSNK1DP48730 415 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 PXNP49023 591 aaPredicted RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 RPS14P62263 151 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 OTUD4Q01804 1114 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 ZBTB16Q05516 673 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 SLC10A7Q0GE19 358 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 SFSWAPQ12872 951 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 BYSLQ13895 437 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 ZNF235Q14590 738 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 NOMO1Q15155 1222 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 MYLK3Q32MK0 819 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 FAM46CQ5VWP2 391 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 HEATR6Q6AI08 1181 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 KIAA1324Q6UXG2 1013 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 DPY19L3Q6ZPD9 716 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 ZC3H18Q86VM9 953 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 WDR5BQ86VZ2 330 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 LONP2Q86WA8 852 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 MMAAQ8IVH4 418 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 TEX26Q8N6G2 289 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 TMIEQ8NEW7 156 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 MDGA1Q8NFP4 955 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 LRRN4Q8WUT4 740 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 GDAP1L1Q96MZ0 367 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 PSKH2Q96QS6 385 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 FERMT1Q9BQL6 677 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 MKRN2Q9H000 416 aaKnown RBP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 KCNH6Q9H252 994 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 RBM22Q9NW64 420 aaKnown RBP eCLIP15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 IL36AQ9UHA7 158 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 SCML1Q9UN30 329 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 ZKSCAN5Q9Y2L8 839 aa15.81■□□□□ 0.12
SLC6A4-205ENST00000579221 C1QTNF3-AMACRE9PGA6 284 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 MTSS1O43312 755 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 ZNF217O75362 1048 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 ADH1BP00325 375 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 IL1BP01584 269 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 SLC8A1P32418 973 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 MMP13P45452 471 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 FNTBP49356 437 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 CCNHP51946 323 aaPredicted RBP15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 EIF3EP60228 445 aaKnown RBP15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 KLF1Q13351 362 aaPredicted RBP15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 USP39Q53GS9 565 aaKnown RBP15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 ARSIQ5FYB1 569 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 TSEN2Q8NCE0 465 aaKnown RBP15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 CHST14Q8NCH0 376 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 ACTL9Q8TC94 416 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 LRIG1Q96JA1 1093 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 NAPGQ99747 312 aaPredicted RBP15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 FRMD8P1Q9BZ68 369 aaPredicted RBP15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 IRF2BPLQ9H1B7 796 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 SLC6A17Q9H1V8 727 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 ITM2CQ9NQX7 267 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 ZSCAN32Q9NX65 697 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 LHX3Q9UBR4 397 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 AMACRQ9UHK6 382 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 PPM1HQ9ULR3 514 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 NCKAP1Q9Y2A7 1128 aa15.8■□□□□ 0.12
SLC6A4-205ENST00000579221 ATG2BQ96BY7 2078 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 CTAGE9A4FU28 777 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 KRIT1O00522 736 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 ZNF189O75820 626 aaPredicted RBP15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 JCHAINP01591 159 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 C7P10643 843 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 PRLRP16471 622 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 TCP1P17987 556 aaKnown RBP15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 C5AR1P21730 350 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 CES1P23141 567 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 SCNN1BP51168 640 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 IFI35P80217 286 aaPredicted RBP15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 ITKQ08881 620 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 DMWDQ09019 674 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 GRM3Q14832 879 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 PRKD1Q15139 912 aaPredicted RBP15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 CST6Q15828 149 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 LONRF2Q1L5Z9 754 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 SLC45A4Q5BKX6 768 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 ATXN7L2Q5T6C5 722 aaPredicted RBP15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 DARS2Q6PI48 645 aaKnown RBP15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 B4GALNT4Q76KP1 1039 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 SRLQ86TD4 932 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 PIP4K2CQ8TBX8 421 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 WDR24Q96S15 920 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 OSBPL9Q96SU4 736 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 CPEB1Q9BZB8 566 aaKnown RBP15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 TPSD1Q9BZJ3 242 aa15.79■□□□□ 0.12
SLC6A4-205ENST00000579221 NT5MQ9NPB1 228 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms