RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PIP4K2CQ8TBX8 421 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 GRIN3AQ8TCU5 1115 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 ALG3Q92685 438 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 FAM131CQ96AQ9 280 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 ZC3H10Q96K80 434 aaKnown RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 RNF157Q96PX1 679 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 ORAI3Q9BRQ5 295 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 NEUROG2Q9H2A3 272 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 C6orf106Q9H6K1 298 aaPredicted RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 EBF2Q9HAK2 575 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 TMEM74BQ9NUR3 256 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 DTLQ9NZJ0 730 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 RCOR3Q9P2K3 495 aaPredicted RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 SAE1Q9UBE0 346 aaPredicted RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 EVLQ9UI08 416 aaPredicted RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 IPO11Q9UI26 975 aaKnown RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 LRRK1Q38SD2 2015 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 PI4KAP42356 2102 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 hCG_1818297A0A087WSY0 165 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 ARHGAP42A6NI28 874 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PATE3B3GLJ2 98 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 SPINT1O43278 529 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PSTPIP1O43586 416 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 LEFTY1O75610 366 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PIGNO95427 931 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 IL1BP01584 269 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PECAM1P16284 738 aaPredicted RBP7.1□□□□□ -1.27
SMG6-209ENST00000571442 ITIH2P19823 946 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 ITPKAP23677 461 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 CTNNA2P26232 953 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 MAOBP27338 520 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 CD6P30203 668 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 CTNNA1P35221 906 aaKnown RBP7.1□□□□□ -1.27
SMG6-209ENST00000571442 NNMTP40261 264 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 ABL2P42684 1182 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PEX5P50542 639 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 DNA2P51530 1060 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 ZNF135P52742 658 aaPredicted RBP7.1□□□□□ -1.27
SMG6-209ENST00000571442 MAXP61244 160 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PPP2CBP62714 309 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PPP2CAP67775 309 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 RPL6Q02878 288 aaKnown RBP7.1□□□□□ -1.27
SMG6-209ENST00000571442 SLC20A2Q08357 652 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 GALNT2Q10471 571 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 CNTN1Q12860 1018 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PDK2Q15119 407 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 LRRC73Q5JTD7 316 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 ZFYVE27Q5T4F4 411 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PIP5KL1Q5T9C9 394 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 AGBL4Q5VU57 503 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 TCEAL6Q6IPX3 200 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 RETSATQ6NUM9 610 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 SPOCD1Q6ZMY3 1216 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 DAAM2Q86T65 1068 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 ZSWIM9Q86XI8 627 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 KIAA2013Q8IYS2 634 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 KATNAL2Q8IYT4 538 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 HDDC3Q8N4P3 179 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PCDH20Q8N6Y1 951 aaKnown RBP7.1□□□□□ -1.27
SMG6-209ENST00000571442 TSEN2Q8NCE0 465 aaKnown RBP7.1□□□□□ -1.27
SMG6-209ENST00000571442 OR2AP1Q8NGE2 309 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 OR8D1Q8WZ84 308 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 TCEAL3Q969E4 200 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 PPP1R9BQ96SB3 815 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 GPR174Q9BXC1 333 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 CEP44Q9C0F1 390 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 ARRDC1-AS1Q9H2J1 176 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 FSCN3Q9NQT6 498 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 RXFP3Q9NSD7 469 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 FBXL12Q9NXK8 326 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 HECAQ9UBI9 543 aaPredicted RBP7.1□□□□□ -1.27
SMG6-209ENST00000571442 UBA2Q9UBT2 640 aaPredicted RBP7.1□□□□□ -1.27
SMG6-209ENST00000571442 LCMT1Q9UIC8 334 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 GGT7Q9UJ14 662 aa7.1□□□□□ -1.27
SMG6-209ENST00000571442 TP53BP1Q12888 1972 aaPredicted RBP7.09□□□□□ -1.27
SMG6-209ENST00000571442 PCDH15Q96QU1 1955 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 CXorf51AA0A1B0GTR3 108 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 GOLGA6L6A8MZA4 724 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 KPNA3O00505 521 aaPredicted RBP7.09□□□□□ -1.27
SMG6-209ENST00000571442 WNT9AO14904 365 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 ZNF217O75362 1048 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 RNASEH2AO75792 299 aaKnown RBP7.09□□□□□ -1.27
SMG6-209ENST00000571442 EPN2O95208 641 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 IPO7O95373 1038 aaKnown RBP7.09□□□□□ -1.27
SMG6-209ENST00000571442 GSRP00390 522 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 DNTTP04053 509 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 IGHV4-34P06331 123 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 PYGMP11217 842 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 ACADMP11310 421 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 CR2P20023 1033 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 C5AR1P21730 350 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 GARSP41250 739 aaKnown RBP7.09□□□□□ -1.27
SMG6-209ENST00000571442 DHPSP49366 369 aaPredicted RBP7.09□□□□□ -1.27
SMG6-209ENST00000571442 ADPRHP54922 357 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 NAP1L1P55209 391 aaKnown RBP7.09□□□□□ -1.27
SMG6-209ENST00000571442 RHOAP61586 193 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 DYNLT1P63172 113 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 ZNF33AQ06730 810 aa7.09□□□□□ -1.27
SMG6-209ENST00000571442 IL10RBQ08334 325 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms