RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PSAPL1Q6NUJ1 521 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 LEKR1Q6ZMV7 388 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 PRPF39Q86UA1 669 aaKnown RBP18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 UMODL1-AS1Q8N2C9 162 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 GRIN3AQ8TCU5 1115 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 FAM131CQ96AQ9 280 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 NUP85Q9BW27 656 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 TM6SF2Q9BZW4 377 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 SLC32A1Q9H598 525 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 NOL6Q9H6R4 1146 aaKnown RBP18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 GAREM1Q9H706 876 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 HECAQ9UBI9 543 aaPredicted RBP18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 IP6K2Q9UHH9 426 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 ANAPC7Q9UJX3 599 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 SLCO1B1Q9Y6L6 691 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 ACACBO00763 2458 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 CER1O95813 267 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 CYP1A2P05177 515 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 CSRP1P21291 193 aaKnown RBP18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 ZNF135P52742 658 aaPredicted RBP18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 SNRPD1P62314 119 aaKnown RBP18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 RACK1P63244 317 aaKnown RBP18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 SERINC3Q13530 473 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 BOLA3Q53S33 107 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 PLPP6Q8IY26 295 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 CASKIN2Q8WXE0 1202 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 ARRDC3Q96B67 414 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 SKA1Q96BD8 255 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 HMCESQ96FZ2 354 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 KCTD15Q96SI1 283 aaPredicted RBP18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 DNAJC7Q99615 494 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 ORAI3Q9BRQ5 295 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 ZDHHC6Q9H6R6 413 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 ZWILCHQ9H900 591 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 AASDHPPTQ9NRN7 309 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 RALYQ9UKM9 306 aaKnown RBP18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 ANKRD6Q9Y2G4 727 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 WASF2Q9Y6W5 498 aa18.68■□□□□ 0.58
SYNGR3-204ENST00000564642 MYO1FO00160 1098 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 CEACAM1P13688 526 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 NDST2P52849 883 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 C21orf59P57076 290 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 PPP2CBP62714 309 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 PPP2CAP67775 309 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 SLC14A1Q13336 389 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 SLC18A3Q16572 532 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 HLA-BQ31612 363 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 RFX8Q6ZV50 586 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 CYP4V2Q6ZWL3 525 aaPredicted RBP18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 ERN2Q76MJ5 926 aaKnown RBP18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 OR2AP1Q8NGE2 309 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 SERAC1Q96JX3 654 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 BTBD6Q96KE9 485 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 KLC2Q9H0B6 622 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 EBF2Q9HAK2 575 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 PREBQ9HCU5 417 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 ABHD10Q9NUJ1 306 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 ASCC3Q8N3C0 2202 aaKnown RBP18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 LAMA1P25391 3075 aa18.67■□□□□ 0.58
SYNGR3-204ENST00000564642 CACNA1EQ15878 2313 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 SSU72P8A0A1W2PR75 194 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 ARHGAP42A6NI28 874 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 UPK3BL1B0FP48 263 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 UPK3BL2E5RIL1 263 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 AKR1B10O60218 316 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 TMCC1O94876 653 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 POP4O95707 220 aaKnown RBP18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 GSRP00390 522 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 ADRB1P08588 477 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 ERCC2P18074 760 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 MAT2AP31153 395 aaKnown RBP18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 NUDT1P36639 197 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 HCAR3P49019 387 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 BNC1Q01954 994 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 RAD51Q06609 339 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 KIF19Q2TAC6 998 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 SMTNL2Q2TAL5 461 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 INO80DQ53TQ3 878 aaPredicted RBP18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 SLC45A4Q5BKX6 768 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 KCNT1Q5JUK3 1230 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 PIP5KL1Q5T9C9 394 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 FBXL19Q6PCT2 694 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 TRIM69Q86WT6 500 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 NIPA2Q8N8Q9 360 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 DEFB124Q8NES8 71 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 HSPH1Q92598 858 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 ARHGEF26Q96DR7 871 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 CELF6Q96J87 481 aaKnown RBP18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 LRIG1Q96JA1 1093 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 SLC6A18Q96N87 628 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 HDAC8Q9BY41 377 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 TRIM5Q9C035 493 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 LRRC19Q9H756 370 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 SNX11Q9Y5W9 270 aa18.66■□□□□ 0.58
SYNGR3-204ENST00000564642 TMEM131Q92545 1883 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 C10orf142B7Z368 130 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 H3BRJ5 948 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 RNF103O00237 685 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms