RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 ME3Q16798 604 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 SYTL3Q4VX76 610 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 SLC45A4Q5BKX6 768 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 NEK10Q6ZWH5 1172 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 FAM160B2Q86V87 743 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 C11orf65Q8NCR3 313 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 CMASQ8NFW8 434 aaPredicted RBP4.99□□□□□ -1.61
LINC00560-201ENST00000564593 ETNPPLQ8TBG4 499 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 GDPD5Q8WTR4 605 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 RANBP17Q9H2T7 1088 aaKnown RBP4.99□□□□□ -1.61
LINC00560-201ENST00000564593 SNTG1Q9NSN8 517 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 KIAA1456Q9P272 454 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 HSPB7Q9UBY9 170 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 SWAP70Q9UH65 585 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 AGO2Q9UKV8 859 aaKnown RBP4.99□□□□□ -1.61
LINC00560-201ENST00000564593 LAS1LQ9Y4W2 734 aaKnown RBP4.99□□□□□ -1.61
LINC00560-201ENST00000564593 PCDHGB5Q9Y5G0 923 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 TRBV5-7A0A0A0MS05 114 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 KIR2DS5A0A0G2JLQ3 304 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 PI4KAP2A4QPH2 592 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 FAM157AC9JC47 383 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 KIR2DS3K7RE56 304 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 RGS2P41220 211 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 DPP6P42658 865 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 CLCNKBP51801 687 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 EIF3BP55884 814 aaKnown RBP4.99□□□□□ -1.61
LINC00560-201ENST00000564593 SETQ01105 290 aaPredicted RBP4.99□□□□□ -1.61
LINC00560-201ENST00000564593 ID2Q02363 134 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 ENTPD8Q5MY95 495 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 TBC1D9BQ66K14 1250 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 ITPRIPL1Q6GPH6 555 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 SLC18B1Q6NT16 456 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 ZNF793Q6ZN11 406 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 YTHDF3Q7Z739 585 aaKnown RBP4.99□□□□□ -1.61
LINC00560-201ENST00000564593 PRIMA1Q86XR5 153 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 NGEFQ8N5V2 710 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 DPP10Q8N608 796 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 IGFBPL1Q8WX77 278 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 DDB2Q92466 427 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 TMEM184CQ9NVA4 438 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 TRBV5-3A0A0A0MS03 114 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 A0A1W2PQM1 296 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 DDTLA6NHG4 134 aaPredicted RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 NPIPB15A6NHN6 443 aaPredicted RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 PRSS47A8MTI9 375 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 KIF1CO43896 1103 aaKnown RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 RBMXL2O75526 392 aaKnown RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 BCAR3O75815 825 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 SPARCP09486 303 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 PSMA4P25789 261 aaKnown RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 YWHAQP27348 245 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 POU1F1P28069 291 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 NAP1L1P55209 391 aaKnown RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 INHBEP58166 350 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 RPS3AP61247 264 aaKnown RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 YWHAZP63104 245 aaKnown RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 TAF11Q15544 211 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 SERTAD4-AS1Q5TG53 156 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 KIAA1614Q5VZ46 1190 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 PAPD7Q5XG87 772 aaKnown RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 GPAT4Q86UL3 456 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 TRIM74Q86UV6 250 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 TRIM73Q86UV7 250 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 FAM185AQ8N0U4 392 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 SLC25A41Q8N5S1 370 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 WIPF2Q8TF74 440 aaPredicted RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 ATOH1Q92858 354 aaPredicted RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 EME1Q96AY2 570 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 DIAPH3Q9NSV4 1193 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 C20orf141Q9NUB4 165 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 PLEKHB1Q9UF11 243 aaPredicted RBP4.98□□□□□ -1.61
LINC00560-201ENST00000564593 PSAT1Q9Y617 370 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 PIAS3Q9Y6X2 628 aa4.98□□□□□ -1.61
LINC00560-201ENST00000564593 FSD2A1L4K1 749 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 ANKRD18BA2A2Z9 1011 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 KCNU1A8MYU2 1149 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 LDLRAD4O15165 306 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 RNMTO43148 476 aaKnown RBP4.97□□□□□ -1.61
LINC00560-201ENST00000564593 TGFB1I1O43294 461 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 SLC25A17O43808 307 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 TIPRLO75663 272 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 SLC2A4P14672 509 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 HOXD9P28356 352 aaPredicted RBP4.97□□□□□ -1.61
LINC00560-201ENST00000564593 ARL3P36405 182 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 CPOXP36551 454 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 ARF3P61204 181 aaPredicted RBP4.97□□□□□ -1.61
LINC00560-201ENST00000564593 RPL7AP62424 266 aaKnown RBP4.97□□□□□ -1.61
LINC00560-201ENST00000564593 ARF1P84077 181 aaKnown RBP4.97□□□□□ -1.61
LINC00560-201ENST00000564593 VEPH1Q14D04 833 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 SMTNL2Q2TAL5 461 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 SUPT20HL1Q3ZLR7 823 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 HMBOX1Q6NT76 420 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 CFAP161Q6P656 301 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 KDELC2Q7Z4H8 507 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 RASSF8Q8NHQ8 419 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 TIGD1Q96MW7 591 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 PIP5K1AQ99755 562 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 BRF2Q9HAW0 419 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 SPAG4Q9NPE6 437 aa4.97□□□□□ -1.61
LINC00560-201ENST00000564593 PNRC2Q9NPJ4 139 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms