RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 OSBPL2Q9H1P3 480 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 WDR55Q9H6Y2 383 aaPredicted RBP13.28□□□□□ -0.28
USB1-207ENST00000563149 ZBTB26Q9HCK0 441 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 SLC38A7Q9NVC3 462 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 PLK2Q9NYY3 685 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.28□□□□□ -0.28
USB1-207ENST00000563149 OR12D3Q9UGF7 316 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 ZDHHC2Q9UIJ5 367 aa13.28□□□□□ -0.28
USB1-207ENST00000563149 FNDC1Q4ZHG4 1894 aaPredicted RBP13.28□□□□□ -0.28
USB1-207ENST00000563149 A0A087X1B8 175 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 I6L893 689 aaPredicted RBP13.27□□□□□ -0.28
USB1-207ENST00000563149 TK2O00142 265 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 AHSGP02765 367 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 SLC35E2BP0CK96 405 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 HSPA1AP0DMV8 641 aaKnown RBP13.27□□□□□ -0.28
USB1-207ENST00000563149 HSPA1BP0DMV9 641 aaKnown RBP13.27□□□□□ -0.28
USB1-207ENST00000563149 EPHA3P29320 983 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 GJA5P36382 358 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 NAGLUP54802 743 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 DNAJB13P59910 316 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 RAB10P61026 200 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 GRB14Q14449 540 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 LDLRAD1Q5T700 205 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 KIAA0319Q5VV43 1072 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 POTEHQ6S545 545 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 ACVR1CQ8NER5 493 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 ZC3H15Q8WU90 426 aaKnown RBP13.27□□□□□ -0.28
USB1-207ENST00000563149 DNAJB3Q8WWF6 145 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 MAELQ96JY0 434 aaKnown RBP13.27□□□□□ -0.28
USB1-207ENST00000563149 FAR2Q96K12 515 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 PGLYRP2Q96PD5 576 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 TBL1YQ9BQ87 522 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 TRIM62Q9BVG3 475 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 CRTAC1Q9NQ79 661 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 UTP6Q9NYH9 597 aaKnown RBP13.27□□□□□ -0.28
USB1-207ENST00000563149 CDH9Q9ULB4 789 aa13.27□□□□□ -0.28
USB1-207ENST00000563149 TXNDC9O14530 226 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 DLX3O60479 287 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 STMN1P16949 149 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 TPH1P17752 444 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 PAMP19021 973 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 ABCG1P45844 678 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 GEMP55040 296 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 ART3Q13508 389 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 EP400NLQ6ZTU2 488 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 BEND5Q7L4P6 421 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 PIWIL4Q7Z3Z4 852 aaKnown RBP13.27□□□□□ -0.29
USB1-207ENST00000563149 TICAM1Q8IUC6 712 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 CENPLQ8N0S6 344 aaPredicted RBP13.27□□□□□ -0.29
USB1-207ENST00000563149 LSMEM2Q8N112 164 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 LZTR1Q8N653 840 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 EFCAB3Q8N7B9 438 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 PPHLN1Q8NEY8 458 aaKnown RBP13.27□□□□□ -0.29
USB1-207ENST00000563149 ZMIZ2Q8NF64 920 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 CEP70Q8NHQ1 597 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 ADAM32Q8TC27 787 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 KCTD4Q8WVF5 259 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 TMEM40Q8WWA1 233 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 SENP8Q96LD8 212 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 APOL2Q9BQE5 337 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 NUF2Q9BZD4 464 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 TKTL2Q9H0I9 626 aa13.27□□□□□ -0.29
USB1-207ENST00000563149 MRPL46Q9H2W6 279 aaKnown RBP13.27□□□□□ -0.29
USB1-207ENST00000563149 CNOT11Q9UKZ1 510 aaKnown RBP13.27□□□□□ -0.29
USB1-207ENST00000563149 COL4A4P53420 1690 aaPredicted RBP13.26□□□□□ -0.29
USB1-207ENST00000563149 GOLGB1Q14789 3259 aaKnown RBP13.26□□□□□ -0.29
USB1-207ENST00000563149 ANKRD33BA6NCL7 494 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 HHLA1C9JL84 531 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 NEMP1O14524 444 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 PTGESO14684 152 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 BCAS2O75934 225 aaPredicted RBP13.26□□□□□ -0.29
USB1-207ENST00000563149 LRIG2O94898 1065 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 RTN3O95197 1032 aaPredicted RBP13.26□□□□□ -0.29
USB1-207ENST00000563149 USP17L7P0C7H9 530 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 PSMD8P48556 350 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 THOP1P52888 689 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 ITGA7Q13683 1181 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 MFSD10Q14728 455 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 MAPRE2Q15555 327 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 USP50Q70EL3 339 aaPredicted RBP13.26□□□□□ -0.29
USB1-207ENST00000563149 GPR142Q7Z601 462 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 AFAP1L2Q8N4X5 818 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 ARRDC4Q8NCT1 418 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 GABPB2Q8TAK5 448 aaPredicted RBP13.26□□□□□ -0.29
USB1-207ENST00000563149 AGR3Q8TD06 166 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 NAT14Q8WUY8 206 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 TOP1MTQ969P6 601 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 RCN3Q96D15 328 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 CCDC126Q96EE4 140 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 SMARCD1Q96GM5 515 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 GPR78Q96P69 363 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 IL12RB2Q99665 862 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 MRPL57Q9BQC6 102 aaKnown RBP13.26□□□□□ -0.29
USB1-207ENST00000563149 WDR41Q9HAD4 459 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 CSNK1G1Q9HCP0 422 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 ENTPD7Q9NQZ7 604 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 NCKIPSDQ9NZQ3 722 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 RIMS3Q9UJD0 308 aa13.26□□□□□ -0.29
USB1-207ENST00000563149 C15orf38-AP3S2A0A0A6YYH1 394 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 PRSS51A0A1B0GVH4 220 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms