RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 ZDHHC4Q9NPG8 344 aa12.47□□□□□ -0.41
USP8-209ENST00000560297 PRSS16Q9NQE7 514 aa12.47□□□□□ -0.41
USP8-209ENST00000560297 RBM22Q9NW64 420 aaKnown RBP eCLIP12.47□□□□□ -0.41
USP8-209ENST00000560297 FCF1Q9Y324 198 aaKnown RBP12.47□□□□□ -0.41
USP8-209ENST00000560297 ACTL7AQ9Y615 435 aa12.47□□□□□ -0.41
USP8-209ENST00000560297 GOLGA6L10A0A0M3HER8 536 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 A0A1W2PQF6 199 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 CFAP69A5D8W1 941 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 KCNK1O00180 336 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 ZNF185O15231 689 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 FANCGO15287 622 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 ALOX15BO15296 676 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 LIASO43766 372 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 RNASEH1O60930 286 aaKnown RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 ZNF821O75541 412 aaPredicted RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 ALDH1A2O94788 518 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 STK10O94804 968 aaKnown RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 PAPSS2O95340 614 aaPredicted RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 JCHAINP01591 159 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 MAPK8P45983 427 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 NUBP1P53384 320 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 BYSLQ13895 437 aaKnown RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 ELAVL3Q14576 367 aaKnown RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 GRM3Q14832 879 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 SIX1Q15475 284 aaPredicted RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 MYLK3Q32MK0 819 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 TEX44Q53QW1 395 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 RALGPS1Q5JS13 557 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 Q6ZVU0 165 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 CREG2Q8IUH2 290 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 TMEM105Q8N8V8 129 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 DTWD2Q8NBA8 298 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 OR2AP1Q8NGE2 309 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 OR2A12Q8NGT7 310 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 OR2T3Q8NH03 318 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 KIF18AQ8NI77 898 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 HTR3CQ8WXA8 447 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 OR8D1Q8WZ84 308 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 NKD2Q969F2 451 aaPredicted RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 LRIG1Q96JA1 1093 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 GDAP1L1Q96MZ0 367 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 IL12RB2Q99665 862 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 TNKS2Q9H2K2 1166 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 SPATA6Q9NWH7 488 aaPredicted RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 TRHDEQ9UKU6 1024 aa12.46□□□□□ -0.41
USP8-209ENST00000560297 DRG1Q9Y295 367 aaKnown RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 R3HDM2Q9Y2K5 976 aaKnown RBP12.46□□□□□ -0.41
USP8-209ENST00000560297 KIAA1549LQ6ZVL6 1849 aa12.46□□□□□ -0.42
USP8-209ENST00000560297 NUP205Q92621 2012 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 TRIOO75962 3097 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 KRIT1O00522 736 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 LAMTOR5O43504 91 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 BNIP3LO60238 219 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 SIN3BO75182 1162 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 IGSF6O95976 241 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 C7P10643 843 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 RBL1P28749 1068 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 HOXA6P31267 233 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 LMNB2Q03252 620 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 ZBTB16Q05516 673 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 FAM46CQ5VWP2 391 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 TMEM92Q6UXU6 159 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 DPY19L3Q6ZPD9 716 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 C1orf210Q8IVY1 113 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 STK40Q8N2I9 435 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 ZNF366Q8N895 744 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 TSEN2Q8NCE0 465 aaKnown RBP12.45□□□□□ -0.42
USP8-209ENST00000560297 TMIEQ8NEW7 156 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 TSTD1Q8NFU3 115 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 C1orf54Q8WWF1 131 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 ZNF592Q92610 1267 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 FAM129BQ96TA1 746 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 MGME1Q9BQP7 344 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 HEPHQ9BQS7 1158 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 CPEB1Q9BZB8 566 aaKnown RBP12.45□□□□□ -0.42
USP8-209ENST00000560297 TM6SF2Q9BZW4 377 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 RSPH9Q9H1X1 276 aaPredicted RBP12.45□□□□□ -0.42
USP8-209ENST00000560297 USP29Q9HBJ7 922 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 CD248Q9HCU0 757 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 NT5MQ9NPB1 228 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 C11orf16Q9NQ32 467 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 SEPT10Q9P0V9 454 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 HECAQ9UBI9 543 aaPredicted RBP12.45□□□□□ -0.42
USP8-209ENST00000560297 LHX3Q9UBR4 397 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 FEZ2Q9UHY8 353 aaPredicted RBP12.45□□□□□ -0.42
USP8-209ENST00000560297 DNPEPQ9ULA0 475 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 ZNF148Q9UQR1 794 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 ATP8A1Q9Y2Q0 1164 aa12.45□□□□□ -0.42
USP8-209ENST00000560297 FAM86C2PA6NEL3 165 aa12.44□□□□□ -0.42
USP8-209ENST00000560297 C5orf60A6NFR6 353 aa12.44□□□□□ -0.42
USP8-209ENST00000560297 ESPNB1AK53 854 aa12.44□□□□□ -0.42
USP8-209ENST00000560297 DLL1O00548 723 aa12.44□□□□□ -0.42
USP8-209ENST00000560297 KCNN4O15554 427 aa12.44□□□□□ -0.42
USP8-209ENST00000560297 ZNF500O60304 480 aaPredicted RBP12.44□□□□□ -0.42
USP8-209ENST00000560297 APBB3O95704 486 aa12.44□□□□□ -0.42
USP8-209ENST00000560297 PRNPP04156 253 aa12.44□□□□□ -0.42
USP8-209ENST00000560297 ITGAVP06756 1048 aa12.44□□□□□ -0.42
USP8-209ENST00000560297 VAV1P15498 845 aa12.44□□□□□ -0.42
USP8-209ENST00000560297 PTPN3P26045 913 aa12.44□□□□□ -0.42
USP8-209ENST00000560297 CHRNA3P32297 505 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms