RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 DNPEPQ9ULA0 475 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 EFR3BQ9Y2G0 817 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 SAR1BQ9Y6B6 198 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 ZFHX2Q9C0A1 2572 aaPredicted RBP12.64□□□□□ -0.39
GABPB1-208ENST00000558970 A0A1W2PQF6 199 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 CHURC1-FNTBB4DL54 471 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 PGRMC1O00264 195 aaKnown RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 KRIT1O00522 736 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 MUSKO15146 869 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 MATN3O15232 486 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 KCNN4O15554 427 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 ZNF821O75541 412 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 PEX11BO96011 259 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 JCHAINP01591 159 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 HLA-DQB2P05538 268 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 CCNB1P14635 433 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 TCP1P17987 556 aaKnown RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 AVPR2P30518 371 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 CXCL12P48061 93 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 PSMD8P48556 350 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 ENPP2Q13822 863 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 PRKD1Q15139 912 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 C9orf64Q5T6V5 341 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 MARC1Q5VT66 337 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 PAPD7Q5XG87 772 aaKnown RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 KIAA1324Q6UXG2 1013 aaKnown RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 DPY19L3Q6ZPD9 716 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 BZW1Q7L1Q6 419 aaKnown RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 SYT13Q7L8C5 426 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 MMAAQ8IVH4 418 aaKnown RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 PGBD5Q8N414 524 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 TAB3Q8N5C8 712 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 DTWD2Q8NBA8 298 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 KCNV2Q8TDN2 545 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 ZNF419Q96HQ0 510 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 AGAP3Q96P47 875 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 QKIQ96PU8 341 aaKnown RBP eCLIP12.63□□□□□ -0.393e-6■■■■□ 21.4
GABPB1-208ENST00000558970 TPSD1Q9BZJ3 242 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 IRF2BPLQ9H1B7 796 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 POLMQ9NP87 494 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 RBM22Q9NW64 420 aaKnown RBP eCLIP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 HECAQ9UBI9 543 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 SUN2Q9UH99 717 aa12.63□□□□□ -0.39
GABPB1-208ENST00000558970 EVLQ9UI08 416 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-208ENST00000558970 CEP192Q8TEP8 1941 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 RNF103O00237 685 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 PLK4O00444 970 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 NPC1O15118 1278 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 INSIG1O15503 277 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 LAMTOR5O43504 91 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 IGSF6O95976 241 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 IL1BP01584 269 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 NDUFV2P19404 249 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 SCNN1BP51168 640 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 CCR3P51677 355 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 CCNHP51946 323 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-208ENST00000558970 NUBP1P53384 320 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 METAP1P53582 386 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 SLC20A2Q08357 652 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 E2F5Q15329 346 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 SIX1Q15475 284 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-208ENST00000558970 HSF5Q4G112 596 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-208ENST00000558970 INO80DQ53TQ3 878 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-208ENST00000558970 SLC45A4Q5BKX6 768 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 CARD16Q5EG05 197 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 CDKL3Q8IVW4 592 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-208ENST00000558970 BBS5Q8N3I7 341 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 RASGEF1CQ8N431 466 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 PCDH20Q8N6Y1 951 aaKnown RBP12.62□□□□□ -0.39
GABPB1-208ENST00000558970 PAF1Q8N7H5 531 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 TTC13Q8NBP0 860 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 PRSS33Q8NF86 280 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 OR2A12Q8NGT7 310 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 HTR3CQ8WXA8 447 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 OR8D1Q8WZ84 308 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 CCDC114Q96M63 670 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 GDAP1L1Q96MZ0 367 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 ZNF599Q96NL3 588 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 TSGA13Q96PP4 275 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 TMEM121Q9BTD3 319 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 MKRN2Q9H000 416 aaKnown RBP12.62□□□□□ -0.39
GABPB1-208ENST00000558970 CD93Q9NPY3 652 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 SEPT3Q9UH03 358 aa12.62□□□□□ -0.39
GABPB1-208ENST00000558970 RIF1Q5UIP0 2472 aaKnown RBP12.61□□□□□ -0.39
GABPB1-208ENST00000558970 KPNA3O00505 521 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-208ENST00000558970 LIASO43766 372 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 URI1O94763 535 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-208ENST00000558970 PIGNO95427 931 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 CTSLP07711 333 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 GABRG2P18507 467 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 PTPN3P26045 913 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 MAGEA9P43362 315 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 KCNJ1P48048 391 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 RENBPP51606 427 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 DGKEP52429 567 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 COPAP53621 1224 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 GDF10P55107 478 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 SNRPD1P62314 119 aaKnown RBP12.61□□□□□ -0.39
GABPB1-208ENST00000558970 DSC2Q02487 901 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms