RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 CARD16Q5EG05 197 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 ATXN7L2Q5T6C5 722 aaPredicted RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 CDKL3Q8IVW4 592 aaPredicted RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 STK40Q8N2I9 435 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 TSEN2Q8NCE0 465 aaKnown RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 TSTD1Q8NFU3 115 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 C1orf54Q8WWF1 131 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 ATG4AQ8WYN0 398 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 MAML1Q92585 1016 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 ZNF592Q92610 1267 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 FATE1Q969F0 183 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 EXOC2Q96KP1 924 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 NAP1L3Q99457 506 aaPredicted RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 RBM22Q9NW64 420 aaKnown RBP eCLIP21.61■■□□□ 1.05
CASC4-204ENST00000557945 SMARCAL1Q9NZC9 954 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 LHX3Q9UBR4 397 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 LAMTOR5O43504 91 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 ZNF821O75541 412 aaPredicted RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 IGSF6O95976 241 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 JCHAINP01591 159 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 OR2AP1Q8NGE2 309 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 OR2A12Q8NGT7 310 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 OR8D1Q8WZ84 308 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 CAPZA3Q96KX2 299 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 GDAP1L1Q96MZ0 367 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 NT5MQ9NPB1 228 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 HECAQ9UBI9 543 aaPredicted RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 TTC7AQ9ULT0 858 aaPredicted RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 TTLL3Q9Y4R7 772 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 KIF2AO00139 706 aaPredicted RBP21.6■■□□□ 1.05
CASC4-204ENST00000557945 MTSS1O43312 755 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 ALDH1A2O94788 518 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 GSRP00390 522 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 RBL1P28749 1068 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 ITKQ08881 620 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 SNX1Q13596 522 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 ELAVL3Q14576 367 aaKnown RBP21.6■■□□□ 1.05
CASC4-204ENST00000557945 SIX1Q15475 284 aaPredicted RBP21.6■■□□□ 1.05
CASC4-204ENST00000557945 HEATR6Q6AI08 1181 aaKnown RBP21.6■■□□□ 1.05
CASC4-204ENST00000557945 MAMSTRQ6ZN01 415 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 DPY19L3Q6ZPD9 716 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 C1orf210Q8IVY1 113 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 PGBD3Q8N328 593 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 TEX26Q8N6G2 289 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 OR6K2Q8NGY2 324 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 OR2T3Q8NH03 318 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 ACTRT1Q8TDG2 376 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 HMGB4Q8WW32 186 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 PSKH2Q96QS6 385 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 FERMT1Q9BQL6 677 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 CEP41Q9BYV8 373 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 FRMD8P1Q9BZ68 369 aaPredicted RBP21.6■■□□□ 1.05
CASC4-204ENST00000557945 BCCIPQ9P287 314 aaKnown RBP eCLIP21.6■■□□□ 1.05
CASC4-204ENST00000557945 DNPEPQ9ULA0 475 aa21.6■■□□□ 1.05
CASC4-204ENST00000557945 RNASEH1O60930 286 aaKnown RBP21.59■■□□□ 1.05
CASC4-204ENST00000557945 APBB3O95704 486 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 TUBB4AP04350 444 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 CCNHP51946 323 aaPredicted RBP21.59■■□□□ 1.05
CASC4-204ENST00000557945 IFI35P80217 286 aaPredicted RBP21.59■■□□□ 1.05
CASC4-204ENST00000557945 ZBTB17Q13105 803 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 FAM182AQ5T1J6 154 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 ANO7Q6IWH7 933 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 CACUL1Q86Y37 369 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 CHST14Q8NCH0 376 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 SLC35B2Q8TB61 432 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 HTR3CQ8WXA8 447 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 FAM129BQ96TA1 746 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 AP1M1Q9BXS5 423 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 SLC6A17Q9H1V8 727 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 FBRSQ9HAH7 460 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 CD248Q9HCU0 757 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 HAUS2Q9NVX0 235 aa21.59■■□□□ 1.05
CASC4-204ENST00000557945 KRIT1O00522 736 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 MUSKO15146 869 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 KCNN4O15554 427 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 LIASO43766 372 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 CHRNA3P32297 505 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 HSPA9P38646 679 aaKnown RBP21.58■■□□□ 1.04
CASC4-204ENST00000557945 RGRP47804 291 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 MAXP61244 160 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 MYLK3Q32MK0 819 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 TSSK4Q6SA08 328 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 KIAA1324Q6UXG2 1013 aaKnown RBP21.58■■□□□ 1.04
CASC4-204ENST00000557945 DSG4Q86SJ6 1040 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 TMPRSS6Q8IU80 811 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 MMAAQ8IVH4 418 aaKnown RBP21.58■■□□□ 1.04
CASC4-204ENST00000557945 PLPP6Q8IY26 295 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 PGBD5Q8N414 524 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.58■■□□□ 1.04
CASC4-204ENST00000557945 GRIN3AQ8TCU5 1115 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 AGAP3Q96P47 875 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 IL12RB2Q99665 862 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 HEPHQ9BQS7 1158 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 LRFN3Q9BTN0 628 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 ZDHHC6Q9H6R6 413 aa21.58■■□□□ 1.04
CASC4-204ENST00000557945 EVLQ9UI08 416 aaPredicted RBP21.58■■□□□ 1.04
CASC4-204ENST00000557945 BCLAF3A2AJT9 711 aaKnown RBP21.57■■□□□ 1.04
CASC4-204ENST00000557945 RNF103O00237 685 aa21.57■■□□□ 1.04
CASC4-204ENST00000557945 PAPSS2O95340 614 aaPredicted RBP21.57■■□□□ 1.04
CASC4-204ENST00000557945 POP4O95707 220 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms