RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 LSSP48449 732 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 SLC11A2P49281 568 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 NUMBP49757 651 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 STK19P49842 368 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 DAOAP59103 153 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 SNRPNP63162 240 aaKnown RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 ECT2LQ008S8 904 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 E2F1Q01094 437 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 BST2Q10589 180 aaKnown RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 OVGP1Q12889 678 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 ELAVL3Q14576 367 aaKnown RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 POM121L1PQ3SYA9 428 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 RESP18Q5W5W9 173 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 NUGGCQ68CJ6 796 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 KRT39Q6A163 491 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 TMC6Q7Z403 805 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 IQCHQ86VS3 1027 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 UNC45BQ8IWX7 931 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 FAM186BQ8IYM0 893 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 APCDD1Q8J025 514 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 SIX6OS1Q8N1H7 587 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 CFAP52Q8N1V2 620 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 TTC39CQ8N584 583 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 PAF1Q8N7H5 531 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 ZNF557Q8N988 423 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 GALNT6Q8NCL4 622 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 OR4C6Q8NH72 309 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 UBA3Q8TBC4 463 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 SNRNP27Q8WVK2 155 aaKnown RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 PTPRN2Q92932 1015 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 FAM131CQ96AQ9 280 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 MED8Q96G25 268 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 PAGE5Q96GU1 130 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 VCPIP1Q96JH7 1222 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 ZNF396Q96N95 335 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 RSRP1Q9BUV0 290 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 ZCCHC2Q9C0B9 1178 aaKnown RBP6.03□□□□□ -1.44
VPS33B-207ENST00000557470 RBSNQ9H1K0 784 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 CAAP1Q9H8G2 361 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 POLR1BQ9H9Y6 1135 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 ASCL3Q9NQ33 180 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 CASS4Q9NQ75 786 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 ABCC13Q9NSE7 274 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 CYTH4Q9UIA0 394 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 MCM8Q9UJA3 840 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 TRAF3IP3Q9Y228 551 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 CEP83Q9Y592 693 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 U3KQA8 63 aa6.03□□□□□ -1.44
VPS33B-207ENST00000557470 TLN1Q9Y490 2541 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 A0A1W2PNR3 127 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 A0A1W2PNU3 283 aaPredicted RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 TYW5A2RUC4 315 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 O00370 1275 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 PIK3R2O00459 728 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 SMAD7O15105 426 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 PLRG1O43660 514 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 ZNF500O60304 480 aaPredicted RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 MAGEC1O60732 1142 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 LUC7L3O95232 432 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 WISP1O95388 367 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 MOCS3O95396 460 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 ASMTLO95671 621 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 LTFP02788 710 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 THEGLP0DJG4 465 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 GIMD1P0DJR0 217 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 SETSIPP0DME0 302 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 CKMT1AP12532 417 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 BMP4P12644 408 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 CD19P15391 556 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 GTF2H1P32780 548 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 PSMC2P35998 433 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 ME1P48163 572 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 RGS7P49802 495 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 MXI1P50539 228 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 ERVPABLB-1P60509 514 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 ENPEPQ07075 957 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 CNTN1Q12860 1018 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 RAPGEF1Q13905 1077 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 STAT4Q14765 748 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 NFIL3Q16649 462 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 SGO2Q562F6 1265 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 DCAF6Q58WW2 860 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 ARSJQ5FYB0 599 aaPredicted RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 MS4A13Q5J8X5 152 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 AGBL4Q5VU57 503 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 KIAA1614Q5VZ46 1190 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 RNF219Q5W0B1 726 aaPredicted RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 PMF1Q6P1K2 205 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 PRPF39Q86UA1 669 aaKnown RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 TRIM69Q86WT6 500 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 RELL1Q8IUW5 271 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 CCDC117Q8IWD4 279 aaPredicted RBP6.02□□□□□ -1.45
VPS33B-207ENST00000557470 CEP57L1Q8IYX8 460 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 LSMEM2Q8N112 164 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 MYO1HQ8N1T3 1032 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 SCML4Q8N228 414 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 TMEM145Q8NBT3 493 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 FBXL13Q8NEE6 735 aa6.02□□□□□ -1.45
VPS33B-207ENST00000557470 DQX1Q8TE96 717 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms