RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 FCF1Q9Y324 198 aaKnown RBP12.67□□□□□ -0.38
SHMT2-221ENST00000555773 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-221ENST00000555773 ACTL7AQ9Y615 435 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 STON1Q9Y6Q2 735 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 NUP205Q92621 2012 aa12.67□□□□□ -0.38
SHMT2-221ENST00000555773 EDDM13A0A1B0GTR0 161 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 TTC34A8MYJ7 566 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 CHURC1-FNTBB4DL54 471 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 RNF40O75150 1001 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 ZNF821O75541 412 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 ECEL1O95672 775 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 POP4O95707 220 aaKnown RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 GAS8O95995 478 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 IFNB1P01574 187 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 CHRM1P11229 460 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 IL12RB1P42701 662 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 MAGEA9P43362 315 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 RECQLP46063 649 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 RPS9P46781 194 aaKnown RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 ZBTB17Q13105 803 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 FZD5Q13467 585 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 DHX34Q14147 1143 aaKnown RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 PARP6Q2NL67 630 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 C2orf27AQ580R0 203 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 CARD16Q5EG05 197 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 EOGTQ5NDL2 527 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 ANKRD20A2Q5SQ80 823 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 ANKRD20A1Q5TYW2 823 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 ANKRD20A3Q5VUR7 823 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 ALG1LQ6GMV1 187 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 ITPRIPL1Q6GPH6 555 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 C22orf39Q6P5X5 142 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 KLHL7Q8IXQ5 586 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 ZNF567Q8N184 647 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 CNTD1Q8N815 330 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 IL17RCQ8NAC3 791 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 TSEN2Q8NCE0 465 aaKnown RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 OR2AP1Q8NGE2 309 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 CCHCR1Q8TD31 782 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 PTPRN2Q92932 1015 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 GDAP1L1Q96MZ0 367 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 SPATA13Q96N96 652 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 PPP1R2P1Q96PQ5 205 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 KRT12Q99456 494 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 GABRG3Q99928 467 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 MGME1Q9BQP7 344 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 POLR1EQ9GZS1 481 aaKnown RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 DDX47Q9H0S4 455 aaKnown RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 MFSD1Q9H3U5 465 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 NT5MQ9NPB1 228 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 KLHL8Q9P2G9 620 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 SIT1Q9Y3P8 196 aa12.66□□□□□ -0.38
SHMT2-221ENST00000555773 MTF2Q9Y483 593 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-221ENST00000555773 WASH3PC4AMC7 463 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 ZBTB24O43167 697 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-221ENST00000555773 SYNCRIPO60506 623 aaKnown RBP12.65□□□□□ -0.38
SHMT2-221ENST00000555773 KLF8O95600 359 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-221ENST00000555773 IGSF6O95976 241 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 EPHX1P07099 455 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 GDF10P55107 478 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 AP1S1P61966 158 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 TUBB4BP68371 445 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 DR1Q01658 176 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 RAD51Q06609 339 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 ITKQ08881 620 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 GRM3Q14832 879 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 STARD3Q14849 445 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 MYLK3Q32MK0 819 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 C9orf64Q5T6V5 341 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 ARHGEF18Q6ZSZ5 1173 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 SRLQ86TD4 932 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 PGBD5Q8N414 524 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 MMGT1Q8N4V1 131 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 PJA1Q8NG27 643 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 OR2A12Q8NGT7 310 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 LRIG1Q96JA1 1093 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 AGAP3Q96P47 875 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 FCRL5Q96RD9 977 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 NUDCD1Q96RS6 583 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 ACOX2Q99424 681 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 IER2Q9BTL4 223 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 CARD6Q9BX69 1037 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 CPEB1Q9BZB8 566 aaKnown RBP12.65□□□□□ -0.38
SHMT2-221ENST00000555773 FOXQ1Q9C009 403 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 SLC25A51Q9H1U9 297 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 FBRSQ9HAH7 460 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 GLOD4Q9HC38 313 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 PCDH9Q9HC56 1237 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 CACNA2D2Q9NY47 1150 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 PAK5Q9P286 719 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 HECAQ9UBI9 543 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-221ENST00000555773 LHX3Q9UBR4 397 aa12.65□□□□□ -0.38
SHMT2-221ENST00000555773 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-221ENST00000555773 FAM187AA6NFU0 413 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 MUSKO15146 869 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 ALOX15BO15296 676 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 INSIG1O15503 277 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 KRT14P02533 472 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 HLA-DQB2P05538 268 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 CR2P20023 1033 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms