RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 CHST14Q8NCH0 376 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 MAML1Q92585 1016 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 P3H4Q92791 437 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 GDAP1L1Q96MZ0 367 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 PSKH2Q96QS6 385 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 LGMNQ99538 433 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 BRD8Q9H0E9 1235 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 CARD9Q9H257 536 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 USP36Q9P275 1121 aaKnown RBP21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 SEPT3Q9UH03 358 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 JRKLQ9Y4A0 524 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 NUP205Q92621 2012 aa21.78■■□□□ 1.08
SDR39U1-208ENST00000554698 MATN3O15232 486 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 ZNF217O75362 1048 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 TJP3O95049 919 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 IGLV3-19P01714 112 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 CTSLP07711 333 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 CHRNA3P32297 505 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 CNR2P34972 360 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 CCNHP51946 323 aaPredicted RBP21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 SNRPD1P62314 119 aaKnown RBP21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 HNRNPDQ14103 355 aaKnown RBP21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 MAP7D1Q3KQU3 841 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 USP39Q53GS9 565 aaKnown RBP21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 ZNF569Q5MCW4 686 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 ATXN7L2Q5T6C5 722 aaPredicted RBP21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 CACUL1Q86Y37 369 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 TEX26Q8N6G2 289 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 CCNYQ8ND76 341 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 TMIEQ8NEW7 156 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 VOPP1Q96AW1 172 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 ZNF419Q96HQ0 510 aaPredicted RBP21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 CINPQ9BW66 212 aaPredicted RBP21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 ITM2CQ9NQX7 267 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 SARDHQ9UL12 918 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 SCML1Q9UN30 329 aa21.77■■□□□ 1.08
SDR39U1-208ENST00000554698 PPP1R12AO14974 1030 aaPredicted RBP21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 ADH1BP00325 375 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 DNTTP04053 509 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 P2RY2P41231 377 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 KLF1Q13351 362 aaPredicted RBP21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 MYLK3Q32MK0 819 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 MARC1Q5VT66 337 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 CCDC13Q8IYE1 715 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 TSEN2Q8NCE0 465 aaKnown RBP21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 LRRN4Q8WUT4 740 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 NSMCE1Q8WV22 266 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 GAB3Q8WWW8 586 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 HEPHQ9BQS7 1158 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 PABPC3Q9H361 631 aaKnown RBP21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 IL36AQ9UHA7 158 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 WASF2Q9Y6W5 498 aa21.76■■□□□ 1.07
SDR39U1-208ENST00000554698 KCNK3O14649 394 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 MUSKO15146 869 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 HRO43593 1189 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 POP4O95707 220 aaKnown RBP21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 IGSF6O95976 241 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 IL1BP01584 269 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 PRNPP04156 253 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 ACADMP11310 421 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 C5AR1P21730 350 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 MSNP26038 577 aaKnown RBP21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 SLC8A1P32418 973 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 PSMD8P48556 350 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 CSNK1DP48730 415 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 TPMTP51580 245 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 RENBPP51606 427 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 NSUN2Q08J23 767 aaKnown RBP eCLIP21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 BYSLQ13895 437 aaKnown RBP21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 PRKD1Q15139 912 aaPredicted RBP21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 FAM46CQ5VWP2 391 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 ZC3H14Q6PJT7 736 aaKnown RBP21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 SLC35F6Q8N357 371 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 PIP4K2CQ8TBX8 421 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 RLN3Q8WXF3 142 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 HAUS1Q96CS2 278 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 LRIG1Q96JA1 1093 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 EXOC2Q96KP1 924 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 CD93Q9NPY3 652 aa21.75■■□□□ 1.07
SDR39U1-208ENST00000554698 C1QTNF3-AMACRE9PGA6 284 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 MID1O15344 667 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 LEFTY1O75610 366 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 RPP40O75818 363 aaKnown RBP21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 CCNB1P14635 433 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 HSPA9P38646 679 aaKnown RBP21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 MMP13P45452 471 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 RGRP47804 291 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 IFI35P80217 286 aaPredicted RBP21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 ZNF235Q14590 738 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 NOMO1Q15155 1222 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 TTC31Q49AM3 519 aaPredicted RBP21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 SEL1L2Q5TEA6 688 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 CCDC181Q5TID7 509 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 USP30Q70CQ3 517 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 BBS5Q8N3I7 341 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 PGBD5Q8N414 524 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 OR6K2Q8NGY2 324 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 GRIN3AQ8TCU5 1115 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 MGME1Q9BQP7 344 aa21.74■■□□□ 1.07
SDR39U1-208ENST00000554698 ARIH1Q9Y4X5 557 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms