RNA–Protein interactions for RNA: ENST00000552562.1

CBX5-205, Transcript of chromobox 5, humanhuman

TSL 4

Gene CBX5, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-205ENST00000552562 CLDN23Q96B33 292 aa8.1□□□□□ -1.11
CBX5-205ENST00000552562 TSGA13Q96PP4 275 aa8.1□□□□□ -1.11
CBX5-205ENST00000552562 QKIQ96PU8 341 aaKnown RBP eCLIP8.1□□□□□ -1.11
CBX5-205ENST00000552562 OSBPL6Q9BZF3 934 aa8.1□□□□□ -1.11
CBX5-205ENST00000552562 TM6SF2Q9BZW4 377 aa8.1□□□□□ -1.11
CBX5-205ENST00000552562 TMEM245Q9H330 911 aa8.1□□□□□ -1.11
CBX5-205ENST00000552562 DNPEPQ9ULA0 475 aa8.1□□□□□ -1.11
CBX5-205ENST00000552562 C5orf42Q9H799 3197 aa8.1□□□□□ -1.11
CBX5-205ENST00000552562 UNC80Q8N2C7 3258 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 TTC24A2A3L6 582 aaPredicted RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 ESPNB1AK53 854 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 RNF223E7ERA6 249 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 KIF2AO00139 706 aaPredicted RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 PDE2AO00408 941 aaPredicted RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 KRIT1O00522 736 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 CES2O00748 559 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 MATN3O15232 486 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 INSIG1O15503 277 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 KCNN4O15554 427 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 LIASO43766 372 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 ATP9BO43861 1147 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 SYNCRIPO60506 623 aaKnown RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 SIN3BO75182 1162 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 URI1O94763 535 aaPredicted RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 HLA-DQB2P05538 268 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 CCNB1P14635 433 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 GKP32189 559 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 MMP13P45452 471 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 RGRP47804 291 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 MAXP61244 160 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 RHOAP61586 193 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 SATB1Q01826 763 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 SLC20A2Q08357 652 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 XRCC4Q13426 336 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 ENPP2Q13822 863 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 ZNF235Q14590 738 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 HNRNPA1L2Q32P51 320 aaKnown RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 INO80DQ53TQ3 878 aaPredicted RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 SLC45A4Q5BKX6 768 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 EOGTQ5NDL2 527 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 TMCO4Q5TGY1 634 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 MARC1Q5VT66 337 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 TIGD7Q6NT04 549 aaPredicted RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 KIAA1211LQ6NV74 962 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 BLOC1S3Q6QNY0 202 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 CACUL1Q86Y37 369 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 LRRC49Q8IUZ0 686 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 CDKL3Q8IVW4 592 aaPredicted RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 PGBD5Q8N414 524 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 PRELID2Q8N945 189 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 CHST14Q8NCH0 376 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 CCDC26Q8TAB7 109 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 SLC35B2Q8TB61 432 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 MAIP1Q8WWC4 291 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 HTR3CQ8WXA8 447 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 MAML1Q92585 1016 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 PTPRN2Q92932 1015 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 ZNF419Q96HQ0 510 aaPredicted RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 ZNF599Q96NL3 588 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 AGAP3Q96P47 875 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 GABRG3Q99928 467 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 CINPQ9BW66 212 aaPredicted RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 SLC6A17Q9H1V8 727 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 CHRDQ9H2X0 955 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 NT5MQ9NPB1 228 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 C11orf16Q9NQ32 467 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 PRSS16Q9NQE7 514 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 RBM22Q9NW64 420 aaKnown RBP eCLIP8.09□□□□□ -1.11
CBX5-205ENST00000552562 DLGAP2Q9P1A6 1054 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 LHX3Q9UBR4 397 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 SEPT3Q9UH03 358 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 TTC7AQ9ULT0 858 aaPredicted RBP8.09□□□□□ -1.11
CBX5-205ENST00000552562 MMP17Q9ULZ9 603 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 SLC8A2Q9UPR5 921 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 TTLL3Q9Y4R7 772 aa8.09□□□□□ -1.11
CBX5-205ENST00000552562 EDDM13A0A1B0GTR0 161 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 A0A1W2PQF6 199 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 HACD1B0YJ81 288 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 CHURC1-FNTBB4DL54 471 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 F5H423 210 aaPredicted RBP8.08□□□□□ -1.12
CBX5-205ENST00000552562 RNF103O00237 685 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 NPC1O15118 1278 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 ATG13O75143 517 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 NEBLO76041 1014 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 TUBB4AP04350 444 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 PTPN3P26045 913 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 SLC19A1P41440 591 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 PAFAH1B1P43034 410 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 RPS9P46781 194 aaKnown RBP8.08□□□□□ -1.12
CBX5-205ENST00000552562 KCNJ1P48048 391 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 RENBPP51606 427 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 CLCN5P51795 746 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 GDF10P55107 478 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 IFI35P80217 286 aaPredicted RBP8.08□□□□□ -1.12
CBX5-205ENST00000552562 ITKQ08881 620 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 WASHC5Q12768 1159 aa8.08□□□□□ -1.12
CBX5-205ENST00000552562 BYSLQ13895 437 aaKnown RBP8.08□□□□□ -1.12
CBX5-205ENST00000552562 HNRNPDQ14103 355 aaKnown RBP8.08□□□□□ -1.12
CBX5-205ENST00000552562 RFTN1Q14699 578 aaPredicted RBP8.08□□□□□ -1.12
CBX5-205ENST00000552562 STARD3Q14849 445 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms