RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PLD5Q8N7P1 536 aa22.91■■□□□ 1.26
BRF1-216ENST00000550208 EXD1Q8NHP7 514 aa22.91■■□□□ 1.26
BRF1-216ENST00000550208 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.91■■□□□ 1.26
BRF1-216ENST00000550208 LRRN4Q8WUT4 740 aa22.91■■□□□ 1.26
BRF1-216ENST00000550208 FAM122AQ96E09 287 aa22.91■■□□□ 1.26
BRF1-216ENST00000550208 HEPHQ9BQS7 1158 aa22.91■■□□□ 1.26
BRF1-216ENST00000550208 LZTFL1Q9NQ48 299 aa22.91■■□□□ 1.26
BRF1-216ENST00000550208 SERGEFQ9UGK8 458 aa22.91■■□□□ 1.26
BRF1-216ENST00000550208 RAB23Q9ULC3 237 aa22.91■■□□□ 1.26
BRF1-216ENST00000550208 SCML1Q9UN30 329 aa22.91■■□□□ 1.26
BRF1-216ENST00000550208 PPP2R2CQ9Y2T4 447 aa22.91■■□□□ 1.26
BRF1-216ENST00000550208 SDK1Q7Z5N4 2213 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 A0A1W2PP55 124 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 PLK4O00444 970 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 APOL1O14791 398 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 FTCDO95954 541 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 ADH1BP00325 375 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 GSRP00390 522 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 GKP32189 559 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 RHOAP61586 193 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 SNRPD1P62314 119 aaKnown RBP22.9■■□□□ 1.26
BRF1-216ENST00000550208 GALNT2Q10471 571 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 MYLK3Q32MK0 819 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 TTC31Q49AM3 519 aaPredicted RBP22.9■■□□□ 1.26
BRF1-216ENST00000550208 SLC36A4Q6YBV0 504 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 HDDC3Q8N4P3 179 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 TMIEQ8NEW7 156 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 OR2AP1Q8NGE2 309 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 OR6K2Q8NGY2 324 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 NEUROG2Q9H2A3 272 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 LHX3Q9UBR4 397 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 IL36AQ9UHA7 158 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 NCKAP1Q9Y2A7 1128 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 WASF2Q9Y6W5 498 aa22.9■■□□□ 1.26
BRF1-216ENST00000550208 CCDC66A2RUB6 948 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 C1QTNF3-AMACRE9PGA6 284 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 NDUFS2O75306 463 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 LEFTY1O75610 366 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 RHOBTB1O94844 696 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 PEX11BO96011 259 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 ACSL1P33121 698 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 DYNLT1P63172 113 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 RPL6Q02878 288 aaKnown RBP22.89■■□□□ 1.25
BRF1-216ENST00000550208 SLC10A7Q0GE19 358 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 FAM46CQ5VWP2 391 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 KAZNQ674X7 775 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 PMS2CLQ68D20 193 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 NPNTQ6UXI9 565 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 USP30Q70CQ3 517 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 LRRC49Q8IUZ0 686 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 CCDC50Q8IVM0 306 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 ATPAF2Q8N5M1 289 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 VOPP1Q96AW1 172 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 ARRDC3Q96B67 414 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 OMDQ99983 421 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 GPR174Q9BXC1 333 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 DTLQ9NZJ0 730 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 PACSIN2Q9UNF0 486 aaPredicted RBP22.89■■□□□ 1.25
BRF1-216ENST00000550208 HEY1Q9Y5J3 304 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 THADAQ6YHU6 1953 aa22.89■■□□□ 1.25
BRF1-216ENST00000550208 PLXND1Q9Y4D7 1925 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 PRR23AA6NEV1 266 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 RNASEH2AO75792 299 aaKnown RBP22.88■■□□□ 1.25
BRF1-216ENST00000550208 POP4O95707 220 aaKnown RBP22.88■■□□□ 1.25
BRF1-216ENST00000550208 PRNPP04156 253 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 ZFXP17010 805 aaPredicted RBP22.88■■□□□ 1.25
BRF1-216ENST00000550208 DRD3P35462 400 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 GARSP41250 739 aaKnown RBP22.88■■□□□ 1.25
BRF1-216ENST00000550208 RWDD2BP57060 319 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 ADCY2Q08462 1091 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 LBRQ14739 615 aaKnown RBP22.88■■□□□ 1.25
BRF1-216ENST00000550208 ELF2Q15723 593 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.88■■□□□ 1.25
BRF1-216ENST00000550208 LPCAT2Q7L5N7 544 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 TSEN2Q8NCE0 465 aaKnown RBP22.88■■□□□ 1.25
BRF1-216ENST00000550208 GRIN3AQ8TCU5 1115 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 ALG3Q92685 438 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 RBM41Q96IZ5 413 aaKnown RBP22.88■■□□□ 1.25
BRF1-216ENST00000550208 EXOC2Q96KP1 924 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 ZNF599Q96NL3 588 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 ZDHHC6Q9H6R6 413 aa22.88■■□□□ 1.25
BRF1-216ENST00000550208 EVLQ9UI08 416 aaPredicted RBP22.88■■□□□ 1.25
BRF1-216ENST00000550208 hCG_1818297A0A087WSY0 165 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 KPNA3O00505 521 aaPredicted RBP22.87■■□□□ 1.25
BRF1-216ENST00000550208 KRIT1O00522 736 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 INSIG1O15503 277 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 DDX3YO15523 660 aaKnown RBP22.87■■□□□ 1.25
BRF1-216ENST00000550208 CST8O60676 142 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 IGSF6O95976 241 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 PLA2G5P39877 138 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 RGRP47804 291 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 DHPSP49366 369 aaPredicted RBP22.87■■□□□ 1.25
BRF1-216ENST00000550208 CNTN1Q12860 1018 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 SFSWAPQ12872 951 aaKnown RBP22.87■■□□□ 1.25
BRF1-216ENST00000550208 TFDP2Q14188 446 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 RFTN1Q14699 578 aaPredicted RBP22.87■■□□□ 1.25
BRF1-216ENST00000550208 TFDP3Q5H9I0 405 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 LAIR1Q6GTX8 287 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 GDAP1L1Q96MZ0 367 aa22.87■■□□□ 1.25
BRF1-216ENST00000550208 TSGA13Q96PP4 275 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms