RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	SOX5	P35711	763 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	CSK	P41240	450 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	TPMT	P51580	245 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	OXCT1	P55809	520 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	POLR2F	P61218	127 aa	Known RBP	7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	NOMO3	P69849	1222 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	CDR2	Q01850	454 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	ZNF33A	Q06730	810 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	NCAPH	Q15003	741 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	SYCP1	Q15431	976 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	PLEKHG6	Q3KR16	790 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	TRIM61	Q5EBN2	209 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	BRMS1L	Q5PSV4	323 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	RABGAP1L	Q5R372	815 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	FAM102A	Q5T9C2	384 aa	Predicted RBP	7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	STPG1	Q5TH74	334 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	TAF3	Q5VWG9	929 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	RAP1GAP2	Q684P5	730 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	ANKRD34A	Q69YU3	496 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	SLC23A3	Q6PIS1	610 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	TRIM72	Q6ZMU5	477 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	ARC	Q7LC44	396 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	ERICH1	Q86X53	443 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	XYLT1	Q86Y38	959 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	SLC41A1	Q8IVJ1	513 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	CFAP52	Q8N1V2	620 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	CARNMT1	Q8N4J0	409 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	OR2T3	Q8NH03	318 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	CEP76	Q8TAP6	659 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	PIGK	Q92643	395 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	NT5C3B	Q969T7	300 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	C18orf8	Q96DM3	657 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	ERLEC1	Q96DZ1	483 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	MYEOV	Q96EZ4	313 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	PGAP3	Q96FM1	320 aa	Predicted RBP	7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	SIPA1	Q96FS4	1042 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	ZNF419	Q96HQ0	510 aa	Predicted RBP	7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	HSPA12B	Q96MM6	686 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	SPAG5	Q96R06	1193 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	ERGIC2	Q96RQ1	377 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	NPY6R	Q99463	290 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	BPIFA3	Q9BQP9	254 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	PCED1A	Q9H1Q7	454 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	HSD3B7	Q9H2F3	369 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	TMEM9B	Q9NQ34	198 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	ITM2C	Q9NQX7	267 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	UBP1	Q9NZI7	540 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	PAXBP1	Q9Y5B6	917 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	ITIH6	Q6UXX5	1313 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	ATXN2	Q99700	1313 aa	Known RBP	7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	PTPRB	P23467	1997 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	SHROOM3	Q8TF72	1996 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	LRRK1	Q38SD2	2015 aa		7.91	□□□□□ -1.14
SNHG1-223	ENST00000545440	SYNJ2BP-COX16	A0A087WUM0	186 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	MEGF11	A6BM72	1044 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	LRRC10B	A6NIK2	292 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	PATE3	B3GLJ2	98 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440		H0Y626	953 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	TM4SF5	O14894	197 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	STK10	O94804	968 aa	Known RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	GFPT2	O94808	682 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	F9	P00740	461 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	CYP1A1	P04798	512 aa	Predicted RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	SRPRA	P08240	638 aa	Known RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	ACADM	P11310	421 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	STAT1	P42224	750 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	CXCR3	P49682	368 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	KLK7	P49862	253 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	SULT1E1	P49888	294 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	GSC	P56915	257 aa	Predicted RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	ST8SIA6	P61647	398 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	FMO1	Q01740	532 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	ID3	Q02535	119 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	ZBTB16	Q05516	673 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	SULT2A1	Q06520	285 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	NME3	Q13232	169 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	SLC12A1	Q13621	1099 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	DUOXA1	Q1HG43	343 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	HNRNPA1L2	Q32P51	320 aa	Known RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	SLC25A52	Q3SY17	297 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	TTC31	Q49AM3	519 aa	Predicted RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	C5orf22	Q49AR2	442 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	FSCB	Q5H9T9	825 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	PPM1J	Q5JR12	505 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	PITRM1	Q5JRX3	1037 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	ACBD5	Q5T8D3	534 aa	Predicted RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	LCE2A	Q5TA79	106 aa	Predicted RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	NAA35	Q5VZE5	725 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	FBXW10	Q5XX13	1052 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	APTX	Q7Z2E3	356 aa	Known RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	CACUL1	Q86Y37	369 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	CCAR2	Q8N163	923 aa	Known RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	CADM4	Q8NFZ8	388 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	NEK11	Q8NG66	645 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	UBASH3B	Q8TF42	649 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	SLC20A1	Q8WUM9	679 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	UBXN4	Q92575	508 aa		7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	TOE1	Q96GM8	510 aa	Known RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	EAF1	Q96JC9	268 aa	Predicted RBP	7.9	□□□□□ -1.14
SNHG1-223	ENST00000545440	MRGPRX3	Q96LB0	322 aa		7.9	□□□□□ -1.14

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