RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PAPD7Q5XG87 772 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 HEATR6Q6AI08 1181 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 NYAP1Q6ZVC0 841 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CACUL1Q86Y37 369 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CDKL3Q8IVW4 592 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 STK40Q8N2I9 435 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CAMKK1Q8N5S9 505 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TSEN2Q8NCE0 465 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 OR2AP1Q8NGE2 309 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 COG1Q8WTW3 980 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 MS4A14Q96JA4 679 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 GDAP1L1Q96MZ0 367 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 FERMT1Q9BQL6 677 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 FBRSQ9HAH7 460 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 HAUS2Q9NVX0 235 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 HECAQ9UBI9 543 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 LHX3Q9UBR4 397 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TTLL3Q9Y4R7 772 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 SAR1BQ9Y6B6 198 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ZNF185O15231 689 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZNF821O75541 412 aaPredicted RBP14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 APBB3O95704 486 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GSRP00390 522 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CSTF1Q05048 431 aaKnown RBP14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PRKD1Q15139 912 aaPredicted RBP14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SLC45A4Q5BKX6 768 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 DARS2Q6PI48 645 aaKnown RBP14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TSSK4Q6SA08 328 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 DPY19L3Q6ZPD9 716 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 DSG4Q86SJ6 1040 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZSCAN30Q86W11 494 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RASGEF1CQ8N431 466 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 OR2A12Q8NGT7 310 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 OR6K2Q8NGY2 324 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MAML1Q92585 1016 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 FATE1Q969F0 183 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 QKIQ96PU8 341 aaKnown RBP eCLIP14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NAP1L3Q99457 506 aaPredicted RBP14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SLC6A17Q9H1V8 727 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NT5MQ9NPB1 228 aa14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RBM22Q9NW64 420 aaKnown RBP eCLIP14.71□□□□□ -0.067e-7■■■□□ 16.4
TNFRSF1A-216ENST00000543995 R3HDM2Q9Y2K5 976 aaKnown RBP14.71□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PGRMC1O00264 195 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 KRIT1O00522 736 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CES2O00748 559 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MTSS1O43312 755 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PAPSS2O95340 614 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 IL1BP01584 269 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 JCHAINP01591 159 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PRLRP16471 622 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 HSPA9P38646 679 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CCNHP51946 323 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 COPAP53621 1224 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RAD51Q06609 339 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ITKQ08881 620 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZNF776Q68DI1 518 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 KIAA1324Q6UXG2 1013 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TMPRSS6Q8IU80 811 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MMAAQ8IVH4 418 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PLPP6Q8IY26 295 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CHST14Q8NCH0 376 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GRIN3AQ8TCU5 1115 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 HTR3CQ8WXA8 447 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ATG4AQ8WYN0 398 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PRCCQ92733 491 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CAPZA3Q96KX2 299 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MRGPRX1Q96LB2 322 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PSKH2Q96QS6 385 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 HEPHQ9BQS7 1158 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CEP41Q9BYV8 373 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MKRN2Q9H000 416 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZDHHC6Q9H6R6 413 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 C10orf88Q9H8K7 445 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CD248Q9HCU0 757 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PRMT8Q9NR22 394 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 IL36AQ9UHA7 158 aa14.7□□□□□ -0.06
TNFRSF1A-216ENST00000543995 K7ESF4 209 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 FANCGO15287 622 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ALOX15BO15296 676 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ACADMP11310 421 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GABRG2P18507 467 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NDUFV2P19404 249 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RBL1P28749 1068 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CHRNA3P32297 505 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PSMD8P48556 350 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PXNP49023 591 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SCNN1BP51168 640 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MAXP61244 160 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 IFI35P80217 286 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZBTB17Q13105 803 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SNX1Q13596 522 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ANGPT1Q15389 498 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MYLK3Q32MK0 819 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TEX26Q8N6G2 289 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MDGA1Q8NFP4 955 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ACTRT1Q8TDG2 376 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 C1orf54Q8WWF1 131 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZNF592Q92610 1267 aa14.69□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SIPA1Q96FS4 1042 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms