RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SNRPD1P62314 119 aaKnown RBP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 ZBTB17Q13105 803 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 HNRNPA1L2Q32P51 320 aaKnown RBP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 PID1Q7Z2X4 250 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 KLHL7Q8IXQ5 586 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 ALLCQ8N6M5 410 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 IL17RCQ8NAC3 791 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 TSEN2Q8NCE0 465 aaKnown RBP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 PJA1Q8NG27 643 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 FRS2Q8WU20 508 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 RTP4Q96DX8 246 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 TEKT5Q96M29 485 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 ACOX2Q99424 681 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 NT5MQ9NPB1 228 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 KLHL8Q9P2G9 620 aaPredicted RBP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 PCYOX1Q9UHG3 505 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 FARP1Q9Y4F1 1045 aaPredicted RBP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 TARSL2A2RTX5 802 aaKnown RBP23.47■■□□□ 1.35
HOMER3-205ENST00000542541 CTAGE15A4D2H0 777 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 GCATO75600 419 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 KLF8O95600 359 aaPredicted RBP23.47■■□□□ 1.35
HOMER3-205ENST00000542541 GAS8O95995 478 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 GSRP00390 522 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 IFNB1P01574 187 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 CTAGE8P0CG41 777 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 CES1P23141 567 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 EOGTQ5NDL2 527 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 TTC27Q6P3X3 843 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 CTAGE6Q86UF2 777 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 CTAGE4Q8IX94 777 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 FLCNQ8NFG4 579 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 RPLP0P6Q8NHW5 317 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 GDAP1L1Q96MZ0 367 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 AGAP3Q96P47 875 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 POLR1EQ9GZS1 481 aaKnown RBP23.47■■□□□ 1.35
HOMER3-205ENST00000542541 L2HGDHQ9H9P8 463 aa23.47■■□□□ 1.35
HOMER3-205ENST00000542541 OPHN1O60890 802 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 IGSF6O95976 241 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 EPHX1P07099 455 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 CHRM1P11229 460 aaPredicted RBP23.46■■□□□ 1.35
HOMER3-205ENST00000542541 ITKQ08881 620 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 FZD5Q13467 585 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 P3H1Q32P28 736 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 CARD16Q5EG05 197 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 ANKRD20A2Q5SQ80 823 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 ANKRD20A1Q5TYW2 823 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 ANKRD20A3Q5VUR7 823 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 ITPRIPL1Q6GPH6 555 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 ZNF567Q8N184 647 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 CNTD1Q8N815 330 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 TXNDC5Q8NBS9 432 aaKnown RBP23.46■■□□□ 1.35
HOMER3-205ENST00000542541 OR2AP1Q8NGE2 309 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 CLDN23Q96B33 292 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 SPATA13Q96N96 652 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 GABRG3Q99928 467 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 MGME1Q9BQP7 344 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 ZDHHC4Q9NPG8 344 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 LHX3Q9UBR4 397 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 ATP8A1Q9Y2Q0 1164 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 TTLL3Q9Y4R7 772 aa23.46■■□□□ 1.35
HOMER3-205ENST00000542541 ANTXRLA6NF34 631 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 WASH3PC4AMC7 463 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 SYNCRIPO60506 623 aaKnown RBP23.45■■□□□ 1.34
HOMER3-205ENST00000542541 ZNF821O75541 412 aaPredicted RBP23.45■■□□□ 1.34
HOMER3-205ENST00000542541 ECEL1O95672 775 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 RPS9P46781 194 aaKnown RBP23.45■■□□□ 1.34
HOMER3-205ENST00000542541 CSNK1DP48730 415 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 GDF10P55107 478 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 RAD51Q06609 339 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 STARD3Q14849 445 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 RALGPS1Q5JS13 557 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 C4orf22Q6V702 233 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 Q6ZVU0 165 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 PTPRN2Q92932 1015 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 SLCO2A1Q92959 643 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 CEP41Q9BYV8 373 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 TM6SF2Q9BZW4 377 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 TNKS2Q9H2K2 1166 aa23.45■■□□□ 1.34
HOMER3-205ENST00000542541 CHURC1-FNTBB4DL54 471 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 ZBTB24O43167 697 aaPredicted RBP23.44■■□□□ 1.34
HOMER3-205ENST00000542541 HLA-DQB2P05538 268 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 HLA-EP13747 358 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 PRKCHP24723 683 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 WASP42768 502 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 MAPK8P45983 427 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 C2orf54Q08AI8 447 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 ARHGEF18Q6ZSZ5 1173 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 KRT12Q99456 494 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 TMEM221A6NGB7 291 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 M0R296 226 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 BNIP3LO60238 219 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 MAGEA9P43362 315 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 SCNN1BP51168 640 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 DHX34Q14147 1143 aaKnown RBP23.44■■□□□ 1.34
HOMER3-205ENST00000542541 SYDE1Q6ZW31 735 aaPredicted RBP23.44■■□□□ 1.34
HOMER3-205ENST00000542541 PGBD5Q8N414 524 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 RYBPQ8N488 228 aaPredicted RBP23.44■■□□□ 1.34
HOMER3-205ENST00000542541 ZNF366Q8N895 744 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 OR2A12Q8NGT7 310 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 CCDC110Q8TBZ0 833 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms