RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 FOXJ1Q92949 421 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 ISG20Q96AZ6 181 aaKnown RBP8.56□□□□□ -1.04
SPARC-208ENST00000538026 TRIM11Q96F44 468 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 PPP1R9BQ96SB3 815 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 EPAS1Q99814 870 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 TM6SF2Q9BZW4 377 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 CEP44Q9C0F1 390 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 PCED1AQ9H1Q7 454 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 ZWILCHQ9H900 591 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 IL21RQ9HBE5 538 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 PCDH18Q9HCL0 1135 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 MRPL47Q9HD33 250 aaKnown RBP8.56□□□□□ -1.04
SPARC-208ENST00000538026 TM9SF3Q9HD45 589 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 LHX3Q9UBR4 397 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 FZD4Q9ULV1 537 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 SCML1Q9UN30 329 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 LOC400499M0QZD8 3231 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 USP24Q9UPU5 2620 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 SMG1Q96Q15 3661 aaKnown RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 CXorf51AA0A1B0GTR3 108 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 A0A1B0GVT2 93 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 RCCD1A6NED2 376 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 AKR1B15C9JRZ8 316 aaPredicted RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 EEF2KO00418 725 aaKnown RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 ARHGAP33O14559 1287 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 KCNK3O14649 394 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 BCAT2O15382 392 aaPredicted RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 PLRG1O43660 514 aaKnown RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 BUB1BO60566 1050 aaPredicted RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 PRAMEF11O60813 436 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 RNF8O76064 485 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 TMCC1O94876 653 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 PROSCO94903 275 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 FSBPO95073 299 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 CFIP05156 583 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 TPM3P06753 285 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 H2AFZP0C0S5 128 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 CD59P13987 128 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 FECHP22830 423 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 CD27P26842 260 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 NNMTP40261 264 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 MAPK8P45983 427 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 HCAR3P49019 387 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 CSNK1EP49674 416 aaKnown RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 YBEYP58557 167 aaPredicted RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 TPI1P60174 286 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 FAM193AP78312 1265 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 GRIK2Q13002 908 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 TRIM14Q14142 442 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 FGL2Q14314 439 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 PIGHQ14442 188 aaPredicted RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 IHHQ14623 411 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 ACAP1Q15027 740 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 KIF19Q2TAC6 998 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 BOLA3Q53S33 107 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 PPP6R3Q5H9R7 873 aaPredicted RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 WDR45BQ5MNZ6 344 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 FAM182AQ5T1J6 154 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 RETSATQ6NUM9 610 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 H2AFVQ71UI9 128 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 PIP4P1Q86T03 277 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 PCDH20Q8N6Y1 951 aaKnown RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 OR2T34Q8NGX1 318 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 OR14C36Q8NHC7 312 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 CEP76Q8TAP6 659 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 SLC35G2Q8TBE7 412 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 ZNF564Q8TBZ8 553 aaPredicted RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 GRIN3AQ8TCU5 1115 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 GANCQ8TET4 914 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 HSPH1Q92598 858 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 SLC6A18Q96N87 628 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 CSPG4P5Q96PW8 444 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 OMDQ99983 421 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 RTKNQ9BST9 563 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 TRIM5Q9C035 493 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 MIR1-1HGQ9H1L0 117 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 HECAQ9UBI9 543 aaPredicted RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 IP6K2Q9UHH9 426 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 SALL4Q9UJQ4 1053 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 CDV3Q9UKY7 258 aaKnown RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 ZFR2Q9UPR6 939 aaKnown RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 CA5BQ9Y2D0 317 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 REXO2Q9Y3B8 237 aaKnown RBP8.55□□□□□ -1.04
SPARC-208ENST00000538026 ASXL3Q9C0F0 2248 aa8.55□□□□□ -1.04
SPARC-208ENST00000538026 A0A1B0GTW7 788 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 A0A1W2PPC4 97 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 TTC24A2A3L6 582 aaPredicted RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 C3orf70A6NLC5 250 aaPredicted RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 MEI4A8MW99 385 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 MYO1FO00160 1098 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 KPNA3O00505 521 aaPredicted RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 FGF10O15520 208 aaPredicted RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 BUB1O43683 1085 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 FOXD2O60548 495 aaPredicted RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 RNASEH1O60930 286 aaKnown RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 MTA2O94776 668 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 LCA5LO95447 670 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 TMEM253P0C7T8 217 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 HTR7P34969 479 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 ABL2P42684 1182 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms