RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 BRMS1LQ5PSV4 323 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 ANKRD20A2Q5SQ80 823 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 ANKRD20A1Q5TYW2 823 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 ANKRD20A3Q5VUR7 823 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 ARHGEF18Q6ZSZ5 1173 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 TAC4Q86UU9 113 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 RALGPS2Q86X27 583 aaPredicted RBP13.13□□□□□ -0.31
PEX11B-203ENST00000537888 IGDCC3Q8IVU1 814 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 C1orf210Q8IVY1 113 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 SRRM1Q8IYB3 904 aaKnown RBP13.13□□□□□ -0.31
PEX11B-203ENST00000537888 PDZD8Q8NEN9 1154 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 DQX1Q8TE96 717 aaKnown RBP13.13□□□□□ -0.31
PEX11B-203ENST00000537888 SH3RF2Q8TEC5 729 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 CKAP2Q8WWK9 683 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 FBXO32Q969P5 355 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 SGSM3Q96HU1 749 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 ZFRQ96KR1 1074 aaKnown RBP13.13□□□□□ -0.31
PEX11B-203ENST00000537888 EPAS1Q99814 870 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 RABEP2Q9H5N1 569 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 WDCPQ9H6R7 721 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 TMPRSS4Q9NRS4 437 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 ABCC13Q9NSE7 274 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 THG1LQ9NWX6 298 aaKnown RBP13.13□□□□□ -0.31
PEX11B-203ENST00000537888 ARHGEF38Q9NXL2 777 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 TBK1Q9UHD2 729 aa13.13□□□□□ -0.31
PEX11B-203ENST00000537888 NDRG2Q9UN36 371 aaKnown RBP13.13□□□□□ -0.31
PEX11B-203ENST00000537888 RIF1Q5UIP0 2472 aaKnown RBP13.12□□□□□ -0.31
PEX11B-203ENST00000537888 SYNJ2BP-COX16A0A087WUM0 186 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 FAM47DPA6NHR8 397 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 FAM72CH0Y354 149 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 MTSS1O43312 755 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 CREB3O43889 395 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 APRTP07741 180 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 STX2P32856 288 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 NBL1P41271 181 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 TUBP50607 506 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 SARNPP82979 210 aaKnown RBP13.12□□□□□ -0.31
PEX11B-203ENST00000537888 ZNF33AQ06730 810 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 RUNX3Q13761 415 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 MPP2Q14168 576 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 PARP6Q2NL67 630 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 ITPRIPL2Q3MIP1 535 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 FAM72AQ5TYM5 149 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 FAM72DQ6L9T8 149 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 CYS1Q717R9 158 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 ZNF534Q76KX8 674 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 YTHDF3Q7Z739 585 aaKnown RBP13.12□□□□□ -0.31
PEX11B-203ENST00000537888 FAM72BQ86X60 149 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 AGGF1Q8N302 714 aaeCLIP13.12□□□□□ -0.31
PEX11B-203ENST00000537888 TAB3Q8N5C8 712 aaPredicted RBP13.12□□□□□ -0.31
PEX11B-203ENST00000537888 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 ADAM32Q8TC27 787 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 DCAKDQ8WVC6 231 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 OSCP1Q8WVF1 389 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 P2RY11Q96G91 374 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 HAPLN3Q96S86 360 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 PAFAH2Q99487 392 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 LGMNQ99538 433 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 PRMT1Q99873 361 aaKnown RBP13.12□□□□□ -0.31
PEX11B-203ENST00000537888 CHRDQ9H2X0 955 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 TRABDQ9H4I3 376 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 EBF3Q9H4W6 596 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 NKIRAS1Q9NYS0 192 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 COX16Q9P0S2 106 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 GMIPQ9P107 970 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 CHMP2BQ9UQN3 213 aa13.12□□□□□ -0.31
PEX11B-203ENST00000537888 TCRBV9S1A1TA0A576 114 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 RNF103O00237 685 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 LEFTY2O00292 366 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 IRAK2O43187 625 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 COCHO43405 550 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 C1QAP02745 245 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 MX2P20592 715 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 PRKCHP24723 683 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 KPNA1P52294 538 aaPredicted RBP13.11□□□□□ -0.31
PEX11B-203ENST00000537888 YWHAGP61981 247 aaKnown RBP eCLIP13.11□□□□□ -0.31
PEX11B-203ENST00000537888 GALNT2Q10471 571 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 WASHC5Q12768 1159 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 GAS6Q14393 721 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 PDGFRLQ15198 375 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 EML3Q32P44 896 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 C6orf89Q6UWU4 347 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 SRLQ86TD4 932 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 CNPY4Q8N129 248 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 KIAA1958Q8N8K9 716 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 DENND1AQ8TEH3 1009 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 MZB1Q8WU39 189 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 SLC44A1Q8WWI5 657 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 EDEM1Q92611 657 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 ATOH1Q92858 354 aaPredicted RBP13.11□□□□□ -0.31
PEX11B-203ENST00000537888 HDAC11Q96DB2 347 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 TKTL2Q9H0I9 626 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 KCNK9Q9NPC2 374 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 SCML2Q9UQR0 700 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 CPQQ9Y646 472 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 WNT6Q9Y6F9 365 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 GVINP1Q7Z2Y8 2422 aa13.11□□□□□ -0.31
PEX11B-203ENST00000537888 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
PEX11B-203ENST00000537888 HOXC13P31276 330 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms