RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 HJURPQ8NCD3 748 aaPredicted RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 C1orf131Q8NDD1 294 aaKnown RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 UCMAQ8WVF2 138 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 RLN3Q8WXF3 142 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 AZIN2Q96A70 460 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 TMA16Q96EY4 203 aaKnown RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 PPP1R13BQ96KQ4 1090 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 NOX5Q96PH1 765 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 SLC2A13Q96QE2 648 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 DDX50Q9BQ39 737 aaKnown RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 NAA15Q9BXJ9 866 aaKnown RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 CIPCQ9C0C6 399 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 VPS45Q9NRW7 570 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 ABCB8Q9NUT2 735 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 ASNSD1Q9NWL6 643 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 ELOVL2Q9NXB9 296 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 CALCOCO1Q9P1Z2 691 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 GGA2Q9UJY4 613 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 CYP8B1Q9UNU6 501 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 NAALADL1Q9UQQ1 740 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 RAD54BQ9Y620 910 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 STON1Q9Y6Q2 735 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 TNRC6BQ9UPQ9 1833 aaKnown RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 IGHV1OR15-9A0A0B4J2B8 117 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 GOLGA6L7A0A1B0GV03 622 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 TYW5A2RUC4 315 aaKnown RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 LGALS16A8MUM7 142 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 WASH3PC4AMC7 463 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 F8VZ95 297 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 SLC30A4O14863 429 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 TIMM44O43615 452 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 TBL1XO60907 577 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 RNGTTO60942 597 aaKnown RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 ZNF217O75362 1048 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 DAB1O75553 588 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 TRUB2O95900 331 aaKnown RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 MOCS2O96007 188 aaPredicted RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 ERBB2P04626 1255 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 TPM2P07951 284 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 MED14OSP0DP75 135 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 PABPC1P11940 636 aaKnown RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 PRKCHP24723 683 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 ARNTP27540 789 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 HLA-FP30511 346 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 CDH5P33151 784 aaPredicted RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 IL12RB1P42701 662 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 SNX16P57768 344 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 RPS24P62847 133 aaKnown RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 PITX1P78337 314 aaPredicted RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 CDK17Q00537 523 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 ID3Q02535 119 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 CREB5Q02930 508 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 EIF4EBP2Q13542 120 aaPredicted RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 ZNF234Q14588 700 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 TAF5Q15542 800 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 FUT11Q495W5 492 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 DCAF6Q58WW2 860 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 ZC3H12AQ5D1E8 599 aaKnown RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 EFHC1Q5JVL4 640 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 SPDYCQ5MJ68 293 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 FKBP15Q5T1M5 1219 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 TMEM215Q68D42 235 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 OR6B2Q6IFH4 312 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 SASS6Q6UVJ0 657 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 KIAA1324Q6UXG2 1013 aaKnown RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 SLC36A4Q6YBV0 504 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 FAM183BPQ6ZVS7 135 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 SLC26A9Q7LBE3 791 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 DGLUCYQ7Z3D6 616 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 KIAA0907Q7Z7F0 614 aaPredicted RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 CHSY1Q86X52 802 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 SULF2Q8IWU5 870 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 ZNF557Q8N988 423 aaPredicted RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 TMEM35BQ8NCS4 154 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 ZNF397Q8NF99 534 aaPredicted RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 WFDC5Q8TCV5 224 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 STK35Q8TDR2 534 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 SORCS1Q8WY21 1168 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 DDX1Q92499 740 aaKnown RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 MYEOVQ96EZ4 313 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 BTN2A3PQ96KV6 586 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 MRGPRX1Q96LB2 322 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 RTKNQ9BST9 563 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 STK33Q9BYT3 514 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 VPS16Q9H269 839 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 ACBD3Q9H3P7 528 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 SMOC1Q9H4F8 434 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 FAM204AQ9H8W3 233 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 FANCLQ9NW38 375 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 DDIT4Q9NX09 232 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 ADAMTS1Q9UHI8 967 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 XPO7Q9UIA9 1087 aaKnown RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 MBD1Q9UIS9 605 aaPredicted RBP7.27□□□□□ -1.25
YBX3-206ENST00000536823 SIK3Q9Y2K2 1263 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 DAAM1Q9Y4D1 1078 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 CACNA1BQ00975 2339 aa7.27□□□□□ -1.25
YBX3-206ENST00000536823 MAP1BP46821 2468 aaKnown RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.26□□□□□ -1.25
YBX3-206ENST00000536823 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.26□□□□□ -1.25
YBX3-206ENST00000536823 PCNX2A6NKB5 2137 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms