RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CUL9Q8IWT3 2517 aa17.75■□□□□ 0.43
NXF1-216ENST00000533499 MUC22E2RYF6 1773 aaPredicted RBP17.74■□□□□ 0.43
NXF1-216ENST00000533499 HACD1B0YJ81 288 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 KIF2AO00139 706 aaPredicted RBP17.74■□□□□ 0.43
NXF1-216ENST00000533499 KRIT1O00522 736 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 FANCGO15287 622 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 KCNN4O15554 427 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 CHRM1P11229 460 aaPredicted RBP17.74■□□□□ 0.43
NXF1-216ENST00000533499 RBL1P28749 1068 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 AVPR2P30518 371 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 RENBPP51606 427 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 CCR3P51677 355 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 DGKEP52429 567 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 MAXP61244 160 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 SNRPD1P62314 119 aaKnown RBP17.74■□□□□ 0.43
NXF1-216ENST00000533499 XRCC4Q13426 336 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 RFTN1Q14699 578 aaPredicted RBP17.74■□□□□ 0.43
NXF1-216ENST00000533499 PRKD1Q15139 912 aaPredicted RBP17.74■□□□□ 0.43
NXF1-216ENST00000533499 KIAA1324Q6UXG2 1013 aaKnown RBP17.74■□□□□ 0.43
NXF1-216ENST00000533499 DTWD2Q8NBA8 298 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 TSEN2Q8NCE0 465 aaKnown RBP17.74■□□□□ 0.43
NXF1-216ENST00000533499 GRIN3AQ8TCU5 1115 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 FRS2Q8WU20 508 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 OR8D1Q8WZ84 308 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 PTPRN2Q92932 1015 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 GDAP1L1Q96MZ0 367 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 SLC6A17Q9H1V8 727 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 ZDHHC6Q9H6R6 413 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 DNPEPQ9ULA0 475 aa17.74■□□□□ 0.43
NXF1-216ENST00000533499 A0A1W2PQF6 199 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 TTC24A2A3L6 582 aaPredicted RBP17.73■□□□□ 0.43
NXF1-216ENST00000533499 TARSL2A2RTX5 802 aaKnown RBP17.73■□□□□ 0.43
NXF1-216ENST00000533499 PRR33A8MZF0 331 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 RNASEH1O60930 286 aaKnown RBP17.73■□□□□ 0.43
NXF1-216ENST00000533499 URI1O94763 535 aaPredicted RBP17.73■□□□□ 0.43
NXF1-216ENST00000533499 ALDH1A2O94788 518 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 STK10O94804 968 aaKnown RBP17.73■□□□□ 0.43
NXF1-216ENST00000533499 PAFAH1B1P43034 410 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 PSMD8P48556 350 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 PXNP49023 591 aaPredicted RBP17.73■□□□□ 0.43
NXF1-216ENST00000533499 SCNN1BP51168 640 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 CCNHP51946 323 aaPredicted RBP17.73■□□□□ 0.43
NXF1-216ENST00000533499 ENPP2Q13822 863 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 POM121L1PQ3SYA9 428 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 C9orf64Q5T6V5 341 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 TSSK4Q6SA08 328 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 DPY19L3Q6ZPD9 716 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 RASGEF1CQ8N431 466 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 CHST14Q8NCH0 376 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 OR2AP1Q8NGE2 309 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 GANCQ8TET4 914 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 HTR3CQ8WXA8 447 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 AGAP3Q96P47 875 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 IER2Q9BTL4 223 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 HAUS2Q9NVX0 235 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 KLHL8Q9P2G9 620 aaPredicted RBP17.73■□□□□ 0.43
NXF1-216ENST00000533499 LHX3Q9UBR4 397 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 EVLQ9UI08 416 aaPredicted RBP17.73■□□□□ 0.43
NXF1-216ENST00000533499 ZNF148Q9UQR1 794 aa17.73■□□□□ 0.43
NXF1-216ENST00000533499 GOLGA6L10A0A0M3HER8 536 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 F5H423 210 aaPredicted RBP17.72■□□□□ 0.43
NXF1-216ENST00000533499 RNF103O00237 685 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 CES2O00748 559 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 GPR37L1O60883 481 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 PEX11BO96011 259 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 GSRP00390 522 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 IL1BP01584 269 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 PRLRP16471 622 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 GKP32189 559 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 VASPP50552 380 aaPredicted RBP17.72■□□□□ 0.43
NXF1-216ENST00000533499 RAD51Q06609 339 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 ZBTB17Q13105 803 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 CAMK2GQ13555 558 aaPredicted RBP17.72■□□□□ 0.43
NXF1-216ENST00000533499 HNRNPDQ14103 355 aaKnown RBP17.72■□□□□ 0.43
NXF1-216ENST00000533499 DSG4Q86SJ6 1040 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 MMAAQ8IVH4 418 aaKnown RBP17.72■□□□□ 0.43
NXF1-216ENST00000533499 OR2A12Q8NGT7 310 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 OR2T3Q8NH03 318 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 ACTRT1Q8TDG2 376 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 ISG20Q96AZ6 181 aaKnown RBP17.72■□□□□ 0.43
NXF1-216ENST00000533499 SCUBE2Q9NQ36 999 aa17.72■□□□□ 0.43
NXF1-216ENST00000533499 CKAP5Q14008 2032 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 CXorf51AA0A1B0GTR3 108 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 KPNA3O00505 521 aaPredicted RBP17.71■□□□□ 0.43
NXF1-216ENST00000533499 MUSKO15146 869 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 INSIG1O15503 277 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 MTSS1O43312 755 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 LIASO43766 372 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 ZNF821O75541 412 aaPredicted RBP17.71■□□□□ 0.43
NXF1-216ENST00000533499 APBB3O95704 486 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 HLA-DQB2P05538 268 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 CHRNA3P32297 505 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 RGRP47804 291 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 IFI35P80217 286 aaPredicted RBP17.71■□□□□ 0.43
NXF1-216ENST00000533499 CSTF1Q05048 431 aaKnown RBP17.71■□□□□ 0.43
NXF1-216ENST00000533499 BYSLQ13895 437 aaKnown RBP17.71■□□□□ 0.43
NXF1-216ENST00000533499 ELAVL3Q14576 367 aaKnown RBP17.71■□□□□ 0.43
NXF1-216ENST00000533499 MYLK3Q32MK0 819 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 ARSIQ5FYB1 569 aa17.71■□□□□ 0.43
NXF1-216ENST00000533499 ZNF776Q68DI1 518 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms