RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 SLC39A13Q96H72 371 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 OXNAD1Q96HP4 312 aaPredicted RBP8.37□□□□□ -1.07
SOX6-210ENST00000528252 VAT1Q99536 393 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 TMEM175Q9BSA9 504 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 BEGAINQ9BUH8 593 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 MLPHQ9BV36 600 aaPredicted RBP8.37□□□□□ -1.07
SOX6-210ENST00000528252 SLC39A8Q9C0K1 460 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 GBA3Q9H227 469 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 CATSPERBQ9H7T0 1116 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 SSU72Q9NP77 194 aaKnown RBP8.37□□□□□ -1.07
SOX6-210ENST00000528252 MOCS1Q9NZB8 636 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 SLC17A7Q9P2U7 560 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 VANGL2Q9ULK5 521 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 MAGED2Q9UNF1 606 aaPredicted RBP8.37□□□□□ -1.07
SOX6-210ENST00000528252 CHKBQ9Y259 395 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 TMEM98Q9Y2Y6 226 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 LAMA2P24043 3122 aaKnown RBP8.37□□□□□ -1.07
SOX6-210ENST00000528252 FAM92AA1XBS5 289 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 WDR91A4D1P6 747 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 BOLA2-SMG1P6H3BVE0 249 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 H7C4K7 107 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 C2CD2LO14523 706 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 FGF10O15520 208 aaPredicted RBP8.37□□□□□ -1.07
SOX6-210ENST00000528252 HMBSP08397 361 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 HOXC13P31276 330 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 COG7P83436 770 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 DNAJC3Q13217 504 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 PSMD5Q16401 504 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 ITPRIPL1Q6GPH6 555 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 ZNF554Q86TJ5 538 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 LZTR1Q8N653 840 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 FBXO22Q8NEZ5 403 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 ALKBH8Q96BT7 664 aaKnown RBP8.37□□□□□ -1.07
SOX6-210ENST00000528252 CENPKQ9BS16 269 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 IGSF5Q9NSI5 407 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.37□□□□□ -1.07
SOX6-210ENST00000528252 MARCH2Q9P0N8 246 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 SLC17A6Q9P2U8 582 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 CIDEBQ9UHD4 219 aa8.37□□□□□ -1.07
SOX6-210ENST00000528252 KIAA0100Q14667 2235 aaKnown RBP8.37□□□□□ -1.07
SOX6-210ENST00000528252 SCN5AQ14524 2016 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 COL4A4P53420 1690 aaPredicted RBP8.36□□□□□ -1.07
SOX6-210ENST00000528252 MAFKO60675 156 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 LPXNO60711 386 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 TBX10O75333 385 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 ZWINTO95229 277 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 HAPLN1P10915 354 aaPredicted RBP8.36□□□□□ -1.07
SOX6-210ENST00000528252 SLC2A3P11169 496 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 CCNCP24863 283 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 OR1D2P34982 312 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 MNX1P50219 401 aaPredicted RBP8.36□□□□□ -1.07
SOX6-210ENST00000528252 GALK1P51570 392 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 LGSNQ5TDP6 509 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 MROH9Q5TGP6 573 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 STEAP4Q687X5 459 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 KCTD11Q693B1 232 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 SH2D5Q6ZV89 423 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 TFAP2DQ7Z6R9 452 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 SLC15A3Q8IY34 581 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 RTL3Q8N8U3 475 aaKnown RBP8.36□□□□□ -1.07
SOX6-210ENST00000528252 INPP5DQ92835 1189 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 ZNF419Q96HQ0 510 aaPredicted RBP8.36□□□□□ -1.07
SOX6-210ENST00000528252 TSGA13Q96PP4 275 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 ALG13Q9NP73 1137 aaKnown RBP8.36□□□□□ -1.07
SOX6-210ENST00000528252 SLCO1B3Q9NPD5 702 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 TLR8Q9NR97 1041 aaKnown RBP8.36□□□□□ -1.07
SOX6-210ENST00000528252 CLIC5Q9NZA1 410 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 IL1RAPL1Q9NZN1 696 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 ZNF180Q9UJW8 692 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 ATP11BQ9Y2G3 1177 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 SH3GLB1Q9Y371 365 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 SLC12A8A0AV02 714 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 HMX2A2RU54 273 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 TRIM43BA6NCK2 446 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 ATP9BO43861 1147 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 KRT38O76015 456 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 OR6B1O95007 311 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 TPH1P17752 444 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 PGAM1P18669 254 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 HTR7P34969 479 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 OXCT1P55809 520 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 SLC18A2Q05940 514 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 PDK4Q16654 411 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 CCDC92Q53HC0 331 aaPredicted RBP8.36□□□□□ -1.07
SOX6-210ENST00000528252 MS4A13Q5J8X5 152 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 SH2D4BQ5SQS7 431 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 CERCAMQ5T4B2 595 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 FAM117BQ6P1L5 589 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 CYS1Q717R9 158 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 TMCO2Q7Z6W1 182 aaPredicted RBP8.36□□□□□ -1.07
SOX6-210ENST00000528252 SCUBE1Q8IWY4 988 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 SPATA22Q8NHS9 363 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 DIS3LQ8TF46 1054 aaKnown RBP8.36□□□□□ -1.07
SOX6-210ENST00000528252 LZICQ8WZA0 190 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 TTC17Q96AE7 1141 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 C1orf74Q96LT6 269 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 NAT9Q9BTE0 207 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 PITPNM3Q9BZ71 974 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 CCSER2Q9H7U1 834 aa8.36□□□□□ -1.07
SOX6-210ENST00000528252 BFARQ9NZS9 450 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms