RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 CHST3Q7LGC8 479 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 OTOAQ7RTW8 1153 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 CCDC186Q7Z3E2 898 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 FAM124AQ86V42 546 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 SRFBP1Q8NEF9 429 aaKnown RBP3.79□□□□□ -1.8
SREK1-208ENST00000520580 SETD6Q8TBK2 473 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 PTP4A1Q93096 173 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 EXOC4Q96A65 974 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 LINC00615Q96LM1 132 aaPredicted RBP3.79□□□□□ -1.8
SREK1-208ENST00000520580 AK8Q96MA6 479 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 MNTQ99583 582 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 CINPQ9BW66 212 aaPredicted RBP3.79□□□□□ -1.8
SREK1-208ENST00000520580 GPR87Q9BY21 358 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 DNAI2Q9GZS0 605 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 CXorf56Q9H5V9 222 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 WSB2Q9NYS7 404 aaPredicted RBP3.79□□□□□ -1.8
SREK1-208ENST00000520580 PLK2Q9NYY3 685 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 NCKIPSDQ9NZQ3 722 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 KIAA1456Q9P272 454 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 A4GNTQ9UNA3 340 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 MTMR6Q9Y217 621 aa3.79□□□□□ -1.8
SREK1-208ENST00000520580 TRBC2A0A5B9 178 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 HS6ST1O60243 411 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 B3GALNT1O75752 331 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 PTMAP06454 111 aaKnown RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 FPR3P25089 353 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 ITPKBP27987 946 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 GPC5P78333 572 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 FAM189BP81408 668 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 TAP1Q03518 808 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 RAB12Q6IQ22 244 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 Q6ZRM9 215 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 GSTA5Q7RTV2 222 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 GDF7Q7Z4P5 450 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 SDCCAG8Q86SQ7 713 aaPredicted RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 DTX2Q86UW9 622 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 LMNTD2Q8IXW0 634 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 PNPLA1Q8N8W4 532 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 C11orf65Q8NCR3 313 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 GDPD5Q8WTR4 605 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 AKAP1Q92667 903 aaKnown RBP eCLIP3.78□□□□□ -1.8
SREK1-208ENST00000520580 MIEF2Q96C03 454 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 RSPRY1Q96DX4 576 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 LOXL4Q96JB6 756 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 CABS1Q96KC9 395 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 TMEM237Q96Q45 408 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 MYCBPQ99417 103 aaPredicted RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 NPAS1Q99742 590 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 ABCG4Q9H172 646 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 MARCH4Q9P2E8 410 aaPredicted RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.78□□□□□ -1.8
SREK1-208ENST00000520580 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 SCAMP1O15126 338 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 TMPRSS11DO60235 418 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 SYNCRIPO60506 623 aaKnown RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 C1RP00736 705 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 SUPT20HL2P0C7V6 817 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 FCGR2AP12318 317 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 IGFBP2P18065 325 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 MATN1P21941 496 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 GP2P55259 537 aaKnown RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 HSD17B7P56937 341 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 CYP4A11Q02928 519 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 ZBTB16Q05516 673 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 PKN1Q16512 942 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 SUPT20HL1Q3ZLR7 823 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 CXorf66Q5JRM2 361 aaPredicted RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 METTL24Q5JXM2 366 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 HIST2H2BCQ6DN03 193 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 HIST2H2BDQ6DRA6 164 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 TATDN1Q6P1N9 297 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 TMEM88Q6PEY1 159 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 CNSTQ6PJW8 725 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 KIRREL2Q6UWL6 708 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 ARHGEF18Q6ZSZ5 1173 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 PTCHD4Q6ZW05 846 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 NUP54Q7Z3B4 507 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 SGMS1Q86VZ5 419 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 TUSC5Q8IXB3 177 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 SIRT6Q8N6T7 355 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 FAM110DQ8TAY7 271 aaPredicted RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 TEKT4Q8WW24 435 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 IP6K1Q92551 441 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 FKBP10Q96AY3 582 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 SPAG5Q96R06 1193 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 BBS4Q96RK4 519 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 AGAP2Q99490 1192 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 H2AFJQ9BTM1 129 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 FSD1Q9BTV5 496 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 RANGRFQ9HD47 186 aaPredicted RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 PFDN4Q9NQP4 134 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 RXFP3Q9NSD7 469 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 TMEM248Q9NWD8 314 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 ADPRHL2Q9NX46 363 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 DDX43Q9NXZ2 648 aaKnown RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 DLGAP2Q9P1A6 1054 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 SEC63Q9UGP8 760 aaKnown RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 ANAPC2Q9UJX6 822 aa3.78□□□□□ -1.8
SREK1-208ENST00000520580 R3HDM2Q9Y2K5 976 aaKnown RBP3.78□□□□□ -1.8
SREK1-208ENST00000520580 PKP3Q9Y446 797 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms