RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 TFB1MQ8WVM0 346 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 HTR3CQ8WXA8 447 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 ARNTL2Q8WYA1 636 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 DPF3Q92784 378 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 N4BP2L2Q92802 583 aaPredicted RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 E2F7Q96AV8 911 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 TNIP3Q96KP6 325 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 FAM111AQ96PZ2 611 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 PPP1R10Q96QC0 940 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 MIPEPQ99797 713 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 BTBD10Q9BSF8 475 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 TINF2Q9BSI4 451 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 MCMBPQ9BTE3 642 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 TMEM120AQ9BXJ8 343 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 EIF2AQ9BY44 585 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 CADM1Q9BY67 442 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 C1orf21Q9H246 121 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 CXCL16Q9H2A7 254 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 DPEP3Q9H4B8 488 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 NGRNQ9NPE2 291 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 PRDM7Q9NQW5 492 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 ARHGEF4Q9NR80 690 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 THAP1Q9NVV9 213 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 GPATCH2LQ9NWQ4 482 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 IRAK4Q9NWZ3 460 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 RNF181Q9P0P0 153 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 PPP1R1BQ9UD71 204 aaPredicted RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 DNAJB4Q9UDY4 337 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 EGFL7Q9UHF1 273 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 HAO1Q9UJM8 370 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 PCOLCE2Q9UKZ9 415 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 NLRC5Q86WI3 1866 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 SDR42E2A6NKP2 422 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 A8MUI8 341 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 I3L4J1 428 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 AP3B1O00203 1094 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 PDHXO00330 501 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 NCAM2O15394 837 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 MTSS1O43312 755 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 AHCYL1O43865 530 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 MFSD11O43934 449 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 GLRA3O75311 464 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 AVILO75366 819 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 GRAP2O75791 330 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 STK10O94804 968 aaKnown RBP5.16□□□□□ -1.58
SDC2-204ENST00000519914 LUC7L3O95232 432 aaKnown RBP5.16□□□□□ -1.58
SDC2-204ENST00000519914 CBX6O95503 412 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 PRKCGP05129 697 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 APRTP07741 180 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 SERPINA6P08185 405 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 CYP2C9P11712 490 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 CCDC130P13994 396 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 ACADSP16219 412 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 GM2AP17900 193 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 TFE3P19532 575 aaPredicted RBP5.16□□□□□ -1.58
SDC2-204ENST00000519914 AOC1P19801 751 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 TKTP29401 623 aaKnown RBP5.16□□□□□ -1.58
SDC2-204ENST00000519914 HTR7P34969 479 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 ARL4AP40617 200 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 NUMBP49757 651 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 CDK7P50613 346 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 CRYBB1P53674 252 aaPredicted RBP5.16□□□□□ -1.58
SDC2-204ENST00000519914 NKX3-2P78367 333 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 BST1Q10588 318 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 TUBB3Q13509 450 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 EIF4EBP2Q13542 120 aaPredicted RBP5.16□□□□□ -1.58
SDC2-204ENST00000519914 SNX17Q15036 470 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 KIZQ2M2Z5 673 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 ACCSLQ4AC99 568 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 RPS26P11Q5JNZ5 115 aaPredicted RBP5.16□□□□□ -1.58
SDC2-204ENST00000519914 SPANXN3Q5MJ09 141 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 ANKRD20A2Q5SQ80 823 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 GRTP1Q5TC63 336 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 ANKRD20A1Q5TYW2 823 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 ANKRD20A3Q5VUR7 823 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 CES4AQ5XG92 561 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 OLFML2BQ68BL8 750 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 MBLAC2Q68D91 279 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 KCTD11Q693B1 232 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 SCYL2Q6P3W7 929 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 TRMT10BQ6PF06 316 aaKnown RBP5.16□□□□□ -1.58
SDC2-204ENST00000519914 PACS1Q6VY07 963 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 PAQR9Q6ZVX9 377 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 ATG4DQ86TL0 474 aaPredicted RBP5.16□□□□□ -1.58
SDC2-204ENST00000519914 PIGZQ86VD9 579 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 LCA5Q86VQ0 697 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 LONP2Q86WA8 852 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 OSTM1Q86WC4 334 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 CEP57Q86XR8 500 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 CCDC117Q8IWD4 279 aaPredicted RBP5.16□□□□□ -1.58
SDC2-204ENST00000519914 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.16□□□□□ -1.58
SDC2-204ENST00000519914 ADGRF2Q8IZF7 708 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 TMEM86AQ8N2M4 240 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 MPP5Q8N3R9 675 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 TEX9Q8N6V9 391 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 CCDC185Q8N715 623 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 PPM1NQ8N819 430 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 B3GALNT2Q8NCR0 500 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 STKLD1Q8NE28 680 aa5.16□□□□□ -1.58
SDC2-204ENST00000519914 APPL2Q8NEU8 664 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms