RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 PPP1R16AQ96I34 528 aa17.71■□□□□ 0.43
DDR1-277ENST00000515219 CELF6Q96J87 481 aaKnown RBP17.71■□□□□ 0.43
DDR1-277ENST00000515219 KLC2Q9H0B6 622 aa17.71■□□□□ 0.43
DDR1-277ENST00000515219 KDM4CQ9H3R0 1056 aa17.71■□□□□ 0.43
DDR1-277ENST00000515219 HECAQ9UBI9 543 aaPredicted RBP17.71■□□□□ 0.43
DDR1-277ENST00000515219 NENFQ9UMX5 172 aa17.71■□□□□ 0.43
DDR1-277ENST00000515219 TP53BP1Q12888 1972 aaPredicted RBP17.7■□□□□ 0.42
DDR1-277ENST00000515219 TMEM131Q92545 1883 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 SSU72P8A0A1W2PR75 194 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 MYO1FO00160 1098 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 RNF103O00237 685 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 TCF4P15884 667 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 IL1R2P27930 398 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 NDST2P52849 883 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 SNRPD1P62314 119 aaKnown RBP17.7■□□□□ 0.42
DDR1-277ENST00000515219 PPP2CBP62714 309 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 PPP2CAP67775 309 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 CCDC15Q0P6D6 951 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 SERINC3Q13530 473 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 BOLA3Q53S33 107 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 SARM1Q6SZW1 724 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 NIPA2Q8N8Q9 360 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 ZNF564Q8TBZ8 553 aaPredicted RBP17.7■□□□□ 0.42
DDR1-277ENST00000515219 CTNNBL1Q8WYA6 563 aaPredicted RBP17.7■□□□□ 0.42
DDR1-277ENST00000515219 HSPH1Q92598 858 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 CHP1Q99653 195 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 ORAI3Q9BRQ5 295 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 ZDHHC6Q9H6R6 413 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 EBF2Q9HAK2 575 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 OSGEPQ9NPF4 335 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 CTTNBP2NLQ9P2B4 639 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 WASF2Q9Y6W5 498 aa17.7■□□□□ 0.42
DDR1-277ENST00000515219 DOCK9Q9BZ29 2069 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 AKR1B15C9JRZ8 316 aaPredicted RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 H3BRJ5 948 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 TMCC1O94876 653 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 KCNK5O95279 499 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 GSRP00390 522 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 H2AFZP0C0S5 128 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 ERCC2P18074 760 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 MAT2AP31153 395 aaKnown RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 SSR1P43307 286 aaKnown RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 GRIA4P48058 902 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 NOVA1P51513 510 aaKnown RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 ZNF135P52742 658 aaPredicted RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 RACK1P63244 317 aaKnown RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 ASTE1Q2TB18 679 aaPredicted RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 PIP5KL1Q5T9C9 394 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 IL27RAQ6UWB1 636 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 LAYNQ6UX15 382 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 H2AFVQ71UI9 128 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 ERN2Q76MJ5 926 aaKnown RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 PRPF39Q86UA1 669 aaKnown RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 CNGA4Q8IV77 575 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 PLPP6Q8IY26 295 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 NETO2Q8NC67 525 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 OR2AP1Q8NGE2 309 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 OR6K2Q8NGY2 324 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 CASKIN2Q8WXE0 1202 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 CCDC42Q96M95 316 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 SLC6A18Q96N87 628 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 PACSIN1Q9BY11 444 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 SLC39A8Q9C0K1 460 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 GAREM1Q9H706 876 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 LRRC19Q9H756 370 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 AASDHPPTQ9NRN7 309 aa17.69■□□□□ 0.42
DDR1-277ENST00000515219 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDR1-277ENST00000515219 DNAAF2Q9NVR5 837 aaKnown RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 CWC15Q9P013 229 aaKnown RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 TPX2Q9ULW0 747 aaKnown RBP17.69■□□□□ 0.42
DDR1-277ENST00000515219 ASCC3Q8N3C0 2202 aaKnown RBP17.68■□□□□ 0.42
DDR1-277ENST00000515219 ARHGAP42A6NI28 874 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 KRIT1O00522 736 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 CER1O95813 267 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 RARAP10276 462 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 GKP32189 559 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 ARL4AP40617 200 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 HCAR3P49019 387 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 TAS2R38P59533 333 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 BNC1Q01954 994 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 CACNA1EQ15878 2313 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 DPYSL2Q16555 572 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 HLA-BQ31612 363 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 INO80DQ53TQ3 878 aaPredicted RBP17.68■□□□□ 0.42
DDR1-277ENST00000515219 ATXN7L2Q5T6C5 722 aaPredicted RBP17.68■□□□□ 0.42
DDR1-277ENST00000515219 PSAPL1Q6NUJ1 521 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 SERAC1Q96JX3 654 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 HDAC8Q9BY41 377 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 RBSNQ9H1K0 784 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 NHEJ1Q9H9Q4 299 aaPredicted RBP17.68■□□□□ 0.42
DDR1-277ENST00000515219 PREBQ9HCU5 417 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 UVRAGQ9P2Y5 699 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 UBA2Q9UBT2 640 aaPredicted RBP17.68■□□□□ 0.42
DDR1-277ENST00000515219 ANKRD6Q9Y2G4 727 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 SNX11Q9Y5W9 270 aa17.68■□□□□ 0.42
DDR1-277ENST00000515219 C10orf142B7Z368 130 aa17.67■□□□□ 0.42
DDR1-277ENST00000515219 J3KR12 359 aa17.67■□□□□ 0.42
DDR1-277ENST00000515219 LATO43561 262 aa17.67■□□□□ 0.42
DDR1-277ENST00000515219 RNGTTO60942 597 aaKnown RBP17.67■□□□□ 0.42
DDR1-277ENST00000515219 POP4O95707 220 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms