RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 BBS12Q6ZW61 710 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 ZC3H18Q86VM9 953 aaKnown RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 VSIG1Q86XK7 387 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 MMAAQ8IVH4 418 aaKnown RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 PGBD5Q8N414 524 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 FAM160A2Q8N612 972 aaPredicted RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 FRMD1Q8N878 549 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 TSEN2Q8NCE0 465 aaKnown RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 CCNYQ8ND76 341 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 OR2A12Q8NGT7 310 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 OR2T3Q8NH03 318 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 ACTL9Q8TC94 416 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 RLN3Q8WXF3 142 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 ATG4AQ8WYN0 398 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 MRGPRX1Q96LB2 322 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 CINPQ9BW66 212 aaPredicted RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 TMEM121BQ9BXQ6 578 aaPredicted RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 ZDHHC6Q9H6R6 413 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 POLMQ9NP87 494 aaPredicted RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 FAM86C1Q9NVL1 165 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 DONSONQ9NYP3 566 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 SEPT10Q9P0V9 454 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 R3HDM2Q9Y2K5 976 aaKnown RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 TTLL3Q9Y4R7 772 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 GOLGA6L9A6NEM1 432 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 ZSCAN5CA6NGD5 496 aaPredicted RBP9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 F5H423 210 aaPredicted RBP9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 NPC1O15118 1278 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 CEP104O60308 925 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 PIGNO95427 931 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 SP9P0CG40 484 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 ZFXP17010 805 aaPredicted RBP9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 PTPN7P35236 360 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 NRLP54845 237 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 COPS2P61201 443 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 RPS14P62263 151 aaKnown RBP9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 ZNF235Q14590 738 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 LBRQ14739 615 aaKnown RBP9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 NOMO1Q15155 1222 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 FAM124AQ86V42 546 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 TMPRSS6Q8IU80 811 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 CCDC13Q8IYE1 715 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 PCDH20Q8N6Y1 951 aaKnown RBP9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 KDM1BQ8NB78 822 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 OR8D1Q8WZ84 308 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 P3H4Q92791 437 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 GLMNQ92990 594 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 HDAC11Q96DB2 347 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 TRIM44Q96DX7 344 aaPredicted RBP9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 MS4A14Q96JA4 679 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 CARD9Q9H257 536 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 NT5MQ9NPB1 228 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 SERGEFQ9UGK8 458 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 SUN2Q9UH99 717 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 EVLQ9UI08 416 aaPredicted RBP9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 SARDHQ9UL12 918 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 CYP8B1Q9UNU6 501 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 R4GN57 208 aa9.96□□□□□ -0.82
TOPBP1-209ENST00000513818 ANKRD36A6QL64 1941 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 H7C0C1 242 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 APOC4-APOC2K7ER74 178 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 KRIT1O00522 736 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 PPP1R12AO14974 1030 aaPredicted RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 AXIN1O15169 862 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 ZNF185O15231 689 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 MID1O15344 667 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 ALDH1A2O94788 518 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 PAPSS2O95340 614 aaPredicted RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 IGSF6O95976 241 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 IL1BP01584 269 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 APOC2P02655 101 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 HLA-DQB2P05538 268 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 MX2P20592 715 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 BCKDHBP21953 392 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 CETN2P41208 172 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 MMP13P45452 471 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 RECQLP46063 649 aaPredicted RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 ATP5OP48047 213 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 GEMIN4P57678 1058 aaKnown RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 PPIDQ08752 370 aaKnown RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 TCF15Q12870 199 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 KLF1Q13351 362 aaPredicted RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 ELAVL3Q14576 367 aaKnown RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 PDK1Q15118 436 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 PRKD1Q15139 912 aaPredicted RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 CARD16Q5EG05 197 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 ARSIQ5FYB1 569 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 LRRC73Q5JTD7 316 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 ZNF776Q68DI1 518 aaPredicted RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 RASSF3Q86WH2 238 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 SLC13A5Q86YT5 568 aaPredicted RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 OR2AP1Q8NGE2 309 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 COG1Q8WTW3 980 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 PRCCQ92733 491 aaPredicted RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 VOPP1Q96AW1 172 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 SIPA1Q96FS4 1042 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 C16orf45Q96MC5 204 aaPredicted RBP9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 NSMCE3Q96MG7 304 aa9.95□□□□□ -0.82
TOPBP1-209ENST00000513818 GDAP1L1Q96MZ0 367 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms