RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 IL36AQ9UHA7 158 aa16.44■□□□□ 0.22
PDLIM5-216ENST00000511767 ZSCAN5CA6NGD5 496 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 PLRG1O43660 514 aaKnown RBP16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 BUB1O43683 1085 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 MFAP3LO75121 409 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 LEFTY1O75610 366 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 GJB3O75712 270 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 H2AFZP0C0S5 128 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 RECQLP46063 649 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 ZNF135P52742 658 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 GEMIN4P57678 1058 aaKnown RBP16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 CYTH1Q15438 398 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 MYLK3Q32MK0 819 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 UAP1L1Q3KQV9 507 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 PARP15Q460N3 678 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 PPP6R3Q5H9R7 873 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 RFX8Q6ZV50 586 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 H2AFVQ71UI9 128 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 GAS2L3Q86XJ1 694 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 OR2I1PQ8NGU4 316 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 GTPBP2Q9BX10 602 aaKnown RBP16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 PACSIN1Q9BY11 444 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 HDAC8Q9BY41 377 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 ZDHHC5Q9C0B5 715 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 NHEJ1Q9H9Q4 299 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 ANAPC7Q9UJX3 599 aa16.43■□□□□ 0.22
PDLIM5-216ENST00000511767 NCOR2Q9Y618 2525 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 A0A1B0GVT2 93 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 MED19A0JLT2 244 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 AKR1B15C9JRZ8 316 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 KPNA3O00505 521 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 WNT9AO14904 365 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 DAPK3O43293 454 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 LATO43561 262 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 AKR1B10O60218 316 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 POP4O95707 220 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 TPM1P09493 284 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 IL4RP24394 825 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 AFF3P51826 1226 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 CCNHP51946 323 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 ATXN3P54252 364 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 RACK1P63244 317 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 GRIK2Q13002 908 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 DPYSL2Q16555 572 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 PIP5KL1Q5T9C9 394 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 POLNQ7Z5Q5 900 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 ARHGAP12Q8IWW6 846 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 MINDY1Q8N5J2 469 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 NETO2Q8NC67 525 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 CASKIN2Q8WXE0 1202 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 SNX19Q92543 992 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 CELF6Q96J87 481 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 ZWILCHQ9H900 591 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 DNAAF2Q9NVR5 837 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 ADAMTS9Q9P2N4 1935 aa16.42■□□□□ 0.22
PDLIM5-216ENST00000511767 UPK3BL1B0FP48 263 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 UPK3BL2E5RIL1 263 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 J3KR12 359 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 KCNK5O95279 499 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 GSRP00390 522 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 CD59P13987 128 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 CSRP1P21291 193 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 AMPD1P23109 780 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 GKP32189 559 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 PAPOLAP51003 745 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 SNRPD1P62314 119 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 SLC25A11Q02978 314 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 CCDC15Q0P6D6 951 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 DPYSQ14117 519 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 KIF19Q2TAC6 998 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 HLA-BQ31612 363 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 PPM1JQ5JR12 505 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 NEK5Q6P3R8 708 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 ERN2Q76MJ5 926 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 PRPF39Q86UA1 669 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 OR2AP1Q8NGE2 309 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 ZNF564Q8TBZ8 553 aaPredicted RBP16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 TEKT4Q8WW24 435 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 LRIG1Q96JA1 1093 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 CCDC42Q96M95 316 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 TM6SF2Q9BZW4 377 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 UVRAGQ9P2Y5 699 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 TPX2Q9ULW0 747 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 DOCK9Q9BZ29 2069 aa16.41■□□□□ 0.22
PDLIM5-216ENST00000511767 PCDH15Q96QU1 1955 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 A0A1W2PR77 199 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 PRAMEF11O60813 436 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 OPHN1O60890 802 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 TMCC1O94876 653 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 PROSCO94903 275 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 WNT1P04628 370 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 TMEM253P0C7T8 217 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 ARSEP51690 589 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 PPP2CBP62714 309 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 PPP2CAP67775 309 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 SMTNL2Q2TAL5 461 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 ATP13A4Q4VNC1 1196 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 DBX2Q6ZNG2 339 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 PIP4P1Q86T03 277 aa16.4■□□□□ 0.22
PDLIM5-216ENST00000511767 ZNF354CQ86Y25 554 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms