RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CSNK1DP48730 415 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 IFI35P80217 286 aaPredicted RBP20.4■□□□□ 0.86
USP53-203ENST00000507597 ZBTB16Q05516 673 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 ITKQ08881 620 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 MTAPQ13126 283 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 BYSLQ13895 437 aaKnown RBP20.4■□□□□ 0.86
USP53-203ENST00000507597 PRKD1Q15139 912 aaPredicted RBP20.4■□□□□ 0.86
USP53-203ENST00000507597 CYTH1Q15438 398 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 DRICH1Q6PGQ1 229 aaPredicted RBP20.4■□□□□ 0.86
USP53-203ENST00000507597 LEKR1Q6ZMV7 388 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 ADAT2Q7Z6V5 191 aaKnown RBP20.4■□□□□ 0.86
USP53-203ENST00000507597 FRS2Q8WU20 508 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 ZNF592Q92610 1267 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 PTPRN2Q92932 1015 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 PPP1R2P1Q96PQ5 205 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 HEPHQ9BQS7 1158 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 POLR1EQ9GZS1 481 aaKnown RBP20.4■□□□□ 0.86
USP53-203ENST00000507597 HCN2Q9UL51 889 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 ZNF148Q9UQR1 794 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 WASH3PC4AMC7 463 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 K7ERQ8 282 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 KRIT1O00522 736 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 SMAD6O43541 496 aaKnown RBP20.39■□□□□ 0.85
USP53-203ENST00000507597 ADAM23O75077 832 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 SIN3BO75182 1162 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 APBB3O95704 486 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 CD160O95971 181 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 JCHAINP01591 159 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 ACADMP11310 421 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 HLA-EP13747 358 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 CA4P22748 312 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 NRLP54845 237 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 TEX44Q53QW1 395 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 Q6ZVU0 165 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 C1orf210Q8IVY1 113 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 DTWD2Q8NBA8 298 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 COG1Q8WTW3 980 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 LRRC45Q96CN5 670 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 PPP1R16AQ96I34 528 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 RUNDC3BQ96NL0 473 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 HERPUD2Q9BSE4 406 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 OSBPL1AQ9BXW6 950 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 PRSS16Q9NQE7 514 aa20.39■□□□□ 0.85
USP53-203ENST00000507597 BCCIPQ9P287 314 aaKnown RBP eCLIP20.39■□□□□ 0.85
USP53-203ENST00000507597 HECAQ9UBI9 543 aaPredicted RBP20.39■□□□□ 0.85
USP53-203ENST00000507597 DRG1Q9Y295 367 aaKnown RBP20.39■□□□□ 0.85
USP53-203ENST00000507597 CHD5Q8TDI0 1954 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 BDP1A6H8Y1 2624 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.38■□□□□ 0.85
USP53-203ENST00000507597 LIASO43766 372 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 AP1S1P61966 158 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 SLC10A7Q0GE19 358 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 GAS6Q14393 721 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 C9orf64Q5T6V5 341 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 ZNF776Q68DI1 518 aaPredicted RBP20.38■□□□□ 0.85
USP53-203ENST00000507597 ITPRIPL1Q6GPH6 555 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 PGBD3Q8N328 593 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 TMIEQ8NEW7 156 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 SLC35B2Q8TB61 432 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 PRCCQ92733 491 aaPredicted RBP20.38■□□□□ 0.85
USP53-203ENST00000507597 NKD2Q969F2 451 aaPredicted RBP20.38■□□□□ 0.85
USP53-203ENST00000507597 TUBGCP5Q96RT8 1024 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 IL12RB2Q99665 862 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 PRRX2Q99811 253 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 TM6SF2Q9BZW4 377 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 NT5MQ9NPB1 228 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 ZDHHC4Q9NPG8 344 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 DYRK4Q9NR20 520 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 KLHL8Q9P2G9 620 aaPredicted RBP20.38■□□□□ 0.85
USP53-203ENST00000507597 IL36AQ9UHA7 158 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 TECTAO75443 2155 aa20.38■□□□□ 0.85
USP53-203ENST00000507597 NUP205Q92621 2012 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 A0A1W2PQ67 120 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 A0A1W2PQF6 199 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 TCRBV21S2A2A0A5A6 115 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 KCNK1O00180 336 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 KCNN4O15554 427 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 PEX11BO96011 259 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 ADH1BP00325 375 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 DNTTP04053 509 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 CHRM1P11229 460 aaPredicted RBP20.37■□□□□ 0.85
USP53-203ENST00000507597 RBL1P28749 1068 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 CHRNA3P32297 505 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 TNNT3P45378 269 aaPredicted RBP20.37■□□□□ 0.85
USP53-203ENST00000507597 SCNN1BP51168 640 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 CCNHP51946 323 aaPredicted RBP20.37■□□□□ 0.85
USP53-203ENST00000507597 CKAP4Q07065 602 aaKnown RBP20.37■□□□□ 0.85
USP53-203ENST00000507597 MYLK3Q32MK0 819 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 TTC31Q49AM3 519 aaPredicted RBP20.37■□□□□ 0.85
USP53-203ENST00000507597 C4orf22Q6V702 233 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 PID1Q7Z2X4 250 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 PAF1Q8N7H5 531 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 ZNF366Q8N895 744 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 TMEM105Q8N8V8 129 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 OR2A12Q8NGT7 310 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 GRK7Q8WTQ7 553 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 SIPA1Q96FS4 1042 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 MS4A14Q96JA4 679 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 NUDCD1Q96RS6 583 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 MGME1Q9BQP7 344 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms