RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 PPARGC1AQ9UBK2 798 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 AK5Q9Y6K8 562 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 DSPP15924 2871 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 A6NNZ2 444 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 EPHB6O15197 1021 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 PIAS2O75928 621 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 GJB6O95452 261 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 CD160O95971 181 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 CYP1A1P04798 512 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 CHRNB2P17787 502 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 MMP8P22894 467 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 SDC4P31431 198 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 L1CAMP32004 1257 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 POLR2FP61218 127 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 INSM1Q01101 510 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 SEMG2Q02383 582 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 SLC20A2Q08357 652 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 ZNF211Q13398 564 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 FGL2Q14314 439 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 ACAP1Q15027 740 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 CCDC14Q49A88 953 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 HS1BP3Q53T59 392 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 MANEALQ5VSG8 457 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 KIAA1161Q6NSJ0 714 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 RWDD4Q6NW29 188 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 PARS2Q7L3T8 475 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 PTAR1Q7Z6K3 402 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 ZNF677Q86XU0 584 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 OR6K2Q8NGY2 324 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 OR4C6Q8NH72 309 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 SLC30A5Q8TAD4 765 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 RFFLQ8WZ73 363 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 NRSN2Q9GZP1 204 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 NLRC4Q9NPP4 1024 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 FAM207AQ9NSI2 230 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 NDFIP2Q9NV92 336 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 CLCA2Q9UQC9 943 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 FADS3Q9Y5Q0 445 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 SHROOM3Q8TF72 1996 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 LRRK1Q38SD2 2015 aa11.76□□□□□ -0.53
HMGCS1-204ENST00000507293 FREM2Q5SZK8 3169 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 COL27A1Q8IZC6 1860 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 RAD51BO15315 384 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 TLX3O43711 291 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 GIMD1P0DJR0 217 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 RHOQP17081 205 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 GKP32189 559 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 ADRA1BP35368 520 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 SOX5P35711 763 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 ETFBP38117 255 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 ABL2P42684 1182 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 ABCG1P45844 678 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 MAPKAPK2P49137 400 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 JAM2P57087 298 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 RPS21P63220 83 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 NRG1Q02297 640 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 RTP5Q14D33 572 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 KRT31Q15323 416 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 ARL13BQ3SXY8 428 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 ZNF542PQ5EBM4 170 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 CT47A1Q5JQC4 288 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 CDKAL1Q5VV42 579 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 KYAT3Q6YP21 454 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 Q6ZSR6 202 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 TMC6Q7Z403 805 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 NLRP14Q86W24 1093 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 RYBPQ8N488 228 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 CCDC185Q8N715 623 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 ENOX1Q8TC92 643 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 GPT2Q8TD30 523 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 BMFQ96LC9 184 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 SLC17A9Q9BYT1 436 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 MAGEB5Q9BZ81 275 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 HECAQ9UBI9 543 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 OR12D3Q9UGF7 316 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 DNAI1Q9UI46 699 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 NEU3Q9UQ49 428 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 ITPR1Q14643 2758 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 ATRXP46100 2492 aa11.75□□□□□ -0.53
HMGCS1-204ENST00000507293 POM121BA6NF01 834 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 C2CD4BA6NLJ0 364 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 FAM72CH0Y354 149 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 AP1G1O43747 822 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 LRIG2O94898 1065 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 PAK4O96013 591 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 TPM2P07951 284 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 ALPPL2P10696 532 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 MYF5P13349 255 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 ITPKBP27987 946 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 PTPN9P43378 593 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 E2F1Q01094 437 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 FKBP15Q5T1M5 1219 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 FAM72AQ5TYM5 149 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 FAM72DQ6L9T8 149 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 KDM7AQ6ZMT4 941 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 TRIM72Q6ZMU5 477 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 LEKR1Q6ZMV7 388 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 STRADAQ7RTN6 431 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 FAM72BQ86X60 149 aa11.74□□□□□ -0.53
HMGCS1-204ENST00000507293 CACTIN-AS1Q8N1I8 211 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms