RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 TP73O15350 636 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 ZBTB24O43167 697 aaPredicted RBP9.52□□□□□ -0.89
TPM3-218ENST00000505010 PRAMEF11O60813 436 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 HLA-DQB2P05538 268 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 APRTP07741 180 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 TPSB2P20231 275 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 HOXD9P28356 352 aaPredicted RBP9.52□□□□□ -0.89
TPM3-218ENST00000505010 WEE1P30291 646 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 FDFT1P37268 417 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 ETFBP38117 255 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 CSKP41240 450 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 MMP13P45452 471 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 DHX9Q08211 1270 aaKnown RBP9.52□□□□□ -0.89
TPM3-218ENST00000505010 IL10RBQ08334 325 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 SEMA5AQ13591 1074 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 TPSAB1Q15661 275 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 ZNF528Q3MIS6 628 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 PPP1R21Q6ZMI0 780 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 ZNF783Q6ZMS7 281 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 CEP128Q6ZU80 1094 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 TMC3Q7Z5M5 1100 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.52□□□□□ -0.89
TPM3-218ENST00000505010 NAT8LQ8N9F0 302 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 MAML1Q92585 1016 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 NXPE3Q969Y0 559 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 EXOC4Q96A65 974 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 TEKT5Q96M29 485 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 PWWP2AQ96N64 755 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 ASB16Q96NS5 453 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 IL12RB2Q99665 862 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 BBS2Q9BXC9 721 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 RBM22Q9NW64 420 aaKnown RBP eCLIP9.52□□□□□ -0.89
TPM3-218ENST00000505010 ZNF446Q9NWS9 450 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 DUS2Q9NX74 493 aaKnown RBP9.52□□□□□ -0.89
TPM3-218ENST00000505010 GDE1Q9NZC3 331 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 VPS28Q9UK41 221 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 CDH7Q9ULB5 785 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 HPCAL4Q9UM19 191 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 ATP8A1Q9Y2Q0 1164 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 CACNA1IQ9P0X4 2223 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 ATRXP46100 2492 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 ASPMQ8IZT6 3477 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 NEDD8-MDP1E9PL57 170 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 SMAPO00193 183 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 CBX4O00257 560 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 KDELR3O43731 214 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 GLDCP23378 1020 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 MZF1P28698 734 aaPredicted RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 CD68P34810 354 aaPredicted RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 HSPA9P38646 679 aaKnown RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 ARL4CP56559 192 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 GAD2Q05329 585 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 ITKQ08881 620 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 SLC10A7Q0GE19 358 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 LMAN2Q12907 356 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 PRPSAP1Q14558 356 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 ZNF235Q14590 738 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 LBRQ14739 615 aaKnown RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 CASP8Q14790 479 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 HIF1AQ16665 826 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 PARP6Q2NL67 630 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 TEX44Q53QW1 395 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 FSCBQ5H9T9 825 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 MPP7Q5T2T1 576 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 TMCO4Q5TGY1 634 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 MARC1Q5VT66 337 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 FYB2Q5VWT5 728 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 CENPUQ71F23 418 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 HDXQ7Z353 690 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 TMEM25Q86YD3 366 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 MREGQ8N565 214 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 PDCD7Q8N8D1 485 aaKnown RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 TSEN2Q8NCE0 465 aaKnown RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 ST13P5Q8NFI4 369 aaPredicted RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 BPIFB1Q8TDL5 484 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 UBLCP1Q8WVY7 318 aaPredicted RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 IRF7Q92985 503 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 FATE1Q969F0 183 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 OTUB2Q96DC9 234 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 ZNF419Q96HQ0 510 aaPredicted RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 SHDQ96IW2 340 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 ZNF599Q96NL3 588 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 MYADMQ96S97 322 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 FOXP3Q9BZS1 431 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 TSPYL1Q9H0U9 437 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 LINC00597Q9H2U6 94 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 PDFQ9HBH1 243 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 GLOD4Q9HC38 313 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 SAYSD1Q9NPB0 183 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 NT5MQ9NPB1 228 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 EIF2B3Q9NR50 452 aaKnown RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 ARHGEF3Q9NR81 526 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 SPHK2Q9NRA0 654 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 UBA2Q9UBT2 640 aaPredicted RBP9.51□□□□□ -0.89
TPM3-218ENST00000505010 FBXO4Q9UKT5 387 aa9.51□□□□□ -0.89
TPM3-218ENST00000505010 TICRRQ7Z2Z1 1910 aa9.5□□□□□ -0.89
TPM3-218ENST00000505010 FANCMQ8IYD8 2048 aa9.5□□□□□ -0.89
TPM3-218ENST00000505010 GOLGA6CA6NDK9 693 aa9.5□□□□□ -0.89
TPM3-218ENST00000505010 GOLGA6BA6NDN3 693 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms