RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 TBC1D3KA0A087X1G2 549 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 TBC1D3FA6NER0 549 aaPredicted RBP19.47■□□□□ 0.71
EPHB4-207ENST00000489808 TBC1D3LB9A6J9 549 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 KPNA3O00505 521 aaPredicted RBP19.47■□□□□ 0.71
EPHB4-207ENST00000489808 PLRG1O43660 514 aaKnown RBP19.47■□□□□ 0.71
EPHB4-207ENST00000489808 LEFTY1O75610 366 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 TMEM253P0C7T8 217 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 TBC1D3HP0C7X1 549 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 MAPK8P45983 427 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 ZNF75DP51815 510 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 CCNHP51946 323 aaPredicted RBP19.47■□□□□ 0.71
EPHB4-207ENST00000489808 ATXN3P54252 364 aaPredicted RBP19.47■□□□□ 0.71
EPHB4-207ENST00000489808 SLC25A11Q02978 314 aaKnown RBP19.47■□□□□ 0.71
EPHB4-207ENST00000489808 CCDC15Q0P6D6 951 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 SMTNL2Q2TAL5 461 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 AGBL4Q5VU57 503 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 TBC1D3GQ6DHY5 549 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 TBC1D3CQ6IPX1 549 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 TBC1D3Q8IZP1 549 aaPredicted RBP19.47■□□□□ 0.71
EPHB4-207ENST00000489808 TC2NQ8N9U0 490 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 TEKT4Q8WW24 435 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 HSPH1Q92598 858 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 ARRDC3Q96B67 414 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 CELF6Q96J87 481 aaKnown RBP19.47■□□□□ 0.71
EPHB4-207ENST00000489808 GTPBP2Q9BX10 602 aaKnown RBP19.47■□□□□ 0.71
EPHB4-207ENST00000489808 TM6SF2Q9BZW4 377 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 EBF2Q9HAK2 575 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 SPTLC3Q9NUV7 552 aa19.47■□□□□ 0.71
EPHB4-207ENST00000489808 NUMA1Q14980 2115 aa19.46■□□□□ 0.71
EPHB4-207ENST00000489808 A0A1W2PPC4 97 aa19.46■□□□□ 0.71
EPHB4-207ENST00000489808 GSRP00390 522 aa19.46■□□□□ 0.71
EPHB4-207ENST00000489808 PAPOLAP51003 745 aaKnown RBP19.46■□□□□ 0.71
EPHB4-207ENST00000489808 SNRPD1P62314 119 aaKnown RBP19.46■□□□□ 0.71
EPHB4-207ENST00000489808 DPYSQ14117 519 aa19.46■□□□□ 0.71
EPHB4-207ENST00000489808 MYLK3Q32MK0 819 aa19.46■□□□□ 0.71
EPHB4-207ENST00000489808 AFMIDQ63HM1 303 aa19.46■□□□□ 0.71
EPHB4-207ENST00000489808 POLNQ7Z5Q5 900 aa19.46■□□□□ 0.71
EPHB4-207ENST00000489808 ZDHHC5Q9C0B5 715 aa19.46■□□□□ 0.71
EPHB4-207ENST00000489808 TM9SF3Q9HD45 589 aa19.46■□□□□ 0.71
EPHB4-207ENST00000489808 DYRK4Q9NR20 520 aa19.46■□□□□ 0.71
EPHB4-207ENST00000489808 TPX2Q9ULW0 747 aaKnown RBP19.46■□□□□ 0.71
EPHB4-207ENST00000489808 ARHGAP42A6NI28 874 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 H3BRJ5 948 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 TMCC1O94876 653 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 PROSCO94903 275 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 POP4O95707 220 aaKnown RBP19.45■□□□□ 0.7
EPHB4-207ENST00000489808 ARL4AP40617 200 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 CSNK1EP49674 416 aaKnown RBP19.45■□□□□ 0.7
EPHB4-207ENST00000489808 AFF3P51826 1226 aaKnown RBP19.45■□□□□ 0.7
EPHB4-207ENST00000489808 TAS2R38P59533 333 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 CYTH1Q15438 398 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 HADHQ16836 314 aaKnown RBP19.45■□□□□ 0.7
EPHB4-207ENST00000489808 UAP1L1Q3KQV9 507 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 PIP5KL1Q5T9C9 394 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 ERN2Q76MJ5 926 aaKnown RBP19.45■□□□□ 0.7
EPHB4-207ENST00000489808 ARHGAP12Q8IWW6 846 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 RYBPQ8N488 228 aaPredicted RBP19.45■□□□□ 0.7
EPHB4-207ENST00000489808 LZTR1Q8N653 840 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 OR2AP1Q8NGE2 309 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 GRIN3AQ8TCU5 1115 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 MRFAP1L1Q96HT8 127 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 LRIG1Q96JA1 1093 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 HDAC8Q9BY41 377 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.45■□□□□ 0.7
EPHB4-207ENST00000489808 LCMT1Q9UIC8 334 aa19.45■□□□□ 0.7
EPHB4-207ENST00000489808 TNRC6BQ9UPQ9 1833 aaKnown RBP19.44■□□□□ 0.7
EPHB4-207ENST00000489808 J3KR12 359 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 LATO43561 262 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 PRAMEF11O60813 436 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 AMPD1P23109 780 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 GKP32189 559 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 SSR1P43307 286 aaKnown RBP19.44■□□□□ 0.7
EPHB4-207ENST00000489808 BNC1Q01954 994 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 GRIK2Q13002 908 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 MINDY1Q8N5J2 469 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 NETO2Q8NC67 525 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 OR2I1PQ8NGU4 316 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 OR6K2Q8NGY2 324 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 SLC35G2Q8TBE7 412 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 VOPP1Q96AW1 172 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 PPP1R16AQ96I34 528 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 CSPG4P5Q96PW8 444 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 PDFQ9HBH1 243 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 PCDH18Q9HCL0 1135 aa19.44■□□□□ 0.7
EPHB4-207ENST00000489808 UBA2Q9UBT2 640 aaPredicted RBP19.44■□□□□ 0.7
EPHB4-207ENST00000489808 A0A1B0GVT2 93 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 IL4RP24394 825 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 PPP2CBP62714 309 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 RACK1P63244 317 aaKnown RBP19.43■□□□□ 0.7
EPHB4-207ENST00000489808 PPP2CAP67775 309 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 TEAD4Q15561 434 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 ATP13A4Q4VNC1 1196 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 ATXN7L2Q5T6C5 722 aaPredicted RBP19.43■□□□□ 0.7
EPHB4-207ENST00000489808 NEK5Q6P3R8 708 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 PRPF39Q86UA1 669 aaKnown RBP19.43■□□□□ 0.7
EPHB4-207ENST00000489808 CPNE8Q86YQ8 564 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 NPWQ8N729 165 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 FAM71BQ8TC56 605 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 TSC1Q92574 1164 aa19.43■□□□□ 0.7
EPHB4-207ENST00000489808 ZDHHC6Q9H6R6 413 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms