RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TEX26Q8N6G2 289 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 LRRN4Q8WUT4 740 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 TFB1MQ8WVM0 346 aaKnown RBP20.24■□□□□ 0.83
COL6A2-208ENST00000485591 HMGB4Q8WW32 186 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 OR8D1Q8WZ84 308 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 PBKQ96KB5 322 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 MRGPRX1Q96LB2 322 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 GDAP1L1Q96MZ0 367 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 QKIQ96PU8 341 aaKnown RBP eCLIP20.24■□□□□ 0.83
COL6A2-208ENST00000485591 FAM129BQ96TA1 746 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 FARP1Q9Y4F1 1045 aaPredicted RBP20.24■□□□□ 0.83
COL6A2-208ENST00000485591 CCDC163A0A0D9SF12 145 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 TCRBV7S2A1N4TA0A589 114 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 BNIP3LO60238 219 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 CEP104O60308 925 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 RNASEH1O60930 286 aaKnown RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 IGSF6O95976 241 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 HSPA9P38646 679 aaKnown RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 MMP13P45452 471 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 RENBPP51606 427 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 CCNHP51946 323 aaPredicted RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 IFI35P80217 286 aaPredicted RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 CSTF1Q05048 431 aaKnown RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 AP1B1Q10567 949 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 ZNF235Q14590 738 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 SLC45A4Q5BKX6 768 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 ZNF776Q68DI1 518 aaPredicted RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 DPY19L3Q6ZPD9 716 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 DSG4Q86SJ6 1040 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 ZC3H18Q86VM9 953 aaKnown RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 TMPRSS6Q8IU80 811 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 RASGEF1CQ8N431 466 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 TSEN2Q8NCE0 465 aaKnown RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 ZNF419Q96HQ0 510 aaPredicted RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 OSBPL9Q96SU4 736 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 NAPGQ99747 312 aaPredicted RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 PRRX2Q99811 253 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 FAM126AQ9BYI3 521 aaPredicted RBP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 BCCIPQ9P287 314 aaKnown RBP eCLIP20.23■□□□□ 0.83
COL6A2-208ENST00000485591 AMACRQ9UHK6 382 aa20.23■□□□□ 0.83
COL6A2-208ENST00000485591 CES2O00748 559 aa20.22■□□□□ 0.83
COL6A2-208ENST00000485591 CCNB1P14635 433 aa20.22■□□□□ 0.83
COL6A2-208ENST00000485591 EIF3EP60228 445 aaKnown RBP20.22■□□□□ 0.83
COL6A2-208ENST00000485591 RPS14P62263 151 aaKnown RBP20.22■□□□□ 0.83
COL6A2-208ENST00000485591 ETF1P62495 437 aaKnown RBP20.22■□□□□ 0.83
COL6A2-208ENST00000485591 ATXN7L2Q5T6C5 722 aaPredicted RBP20.22■□□□□ 0.83
COL6A2-208ENST00000485591 CHST14Q8NCH0 376 aa20.22■□□□□ 0.83
COL6A2-208ENST00000485591 PRCCQ92733 491 aaPredicted RBP20.22■□□□□ 0.83
COL6A2-208ENST00000485591 NELL1Q92832 810 aa20.22■□□□□ 0.83
COL6A2-208ENST00000485591 EXOC2Q96KP1 924 aa20.22■□□□□ 0.83
COL6A2-208ENST00000485591 IL12RB2Q99665 862 aa20.22■□□□□ 0.83
COL6A2-208ENST00000485591 MGME1Q9BQP7 344 aa20.22■□□□□ 0.83
COL6A2-208ENST00000485591 SLC6A17Q9H1V8 727 aa20.22■□□□□ 0.83
COL6A2-208ENST00000485591 HECAQ9UBI9 543 aaPredicted RBP20.22■□□□□ 0.83
COL6A2-208ENST00000485591 FANCMQ8IYD8 2048 aa20.22■□□□□ 0.83
COL6A2-208ENST00000485591 CTAGE9A4FU28 777 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 KCNK1O00180 336 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 MUSKO15146 869 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 FANCGO15287 622 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 MTSS1O43312 755 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 FGGP02679 453 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 RBP3P10745 1247 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 TCP1P17987 556 aaKnown RBP20.21■□□□□ 0.83
COL6A2-208ENST00000485591 CHRNA3P32297 505 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 RGRP47804 291 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 CSNK1DP48730 415 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 PXNP49023 591 aaPredicted RBP20.21■□□□□ 0.83
COL6A2-208ENST00000485591 NRLP54845 237 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 ZBTB16Q05516 673 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 NSUN2Q08J23 767 aaKnown RBP eCLIP20.21■□□□□ 0.83
COL6A2-208ENST00000485591 DMWDQ09019 674 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 PAPD7Q5XG87 772 aaKnown RBP20.21■□□□□ 0.83
COL6A2-208ENST00000485591 NYAP1Q6ZVC0 841 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 MMAAQ8IVH4 418 aaKnown RBP20.21■□□□□ 0.83
COL6A2-208ENST00000485591 CDKL3Q8IVW4 592 aaPredicted RBP20.21■□□□□ 0.83
COL6A2-208ENST00000485591 PGBD3Q8N328 593 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 PGBD5Q8N414 524 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 MAIP1Q8WWC4 291 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 SIPA1Q96FS4 1042 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 LRIG1Q96JA1 1093 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 HEPHQ9BQS7 1158 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 FRMD8P1Q9BZ68 369 aaPredicted RBP20.21■□□□□ 0.83
COL6A2-208ENST00000485591 HAUS2Q9NVX0 235 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 IL36AQ9UHA7 158 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 PPM1HQ9ULR3 514 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 TTC7AQ9ULT0 858 aaPredicted RBP20.21■□□□□ 0.83
COL6A2-208ENST00000485591 R3HDM2Q9Y2K5 976 aaKnown RBP20.21■□□□□ 0.83
COL6A2-208ENST00000485591 WASF2Q9Y6W5 498 aa20.21■□□□□ 0.83
COL6A2-208ENST00000485591 C1QTNF3-AMACRE9PGA6 284 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 H7C0C1 242 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 AXIN1O15169 862 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 ZNF189O75820 626 aaPredicted RBP20.2■□□□□ 0.82
COL6A2-208ENST00000485591 POP4O95707 220 aaKnown RBP20.2■□□□□ 0.82
COL6A2-208ENST00000485591 ADH1BP00325 375 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 IL1BP01584 269 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 PRNPP04156 253 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 CTSLP07711 333 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 SP9P0CG40 484 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 PRLRP16471 622 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 CR2P20023 1033 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms