RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 WASF2Q9Y6W5 498 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 ZSCAN5CA6NGD5 496 aaPredicted RBP16.51■□□□□ 0.23
DDR1-246ENST00000485023 ARHGAP42A6NI28 874 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 LRRC72A6NJI9 287 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 PRR5-ARHGAP8B1AHC4 643 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 KRIT1O00522 736 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 FOXD2O60548 495 aaPredicted RBP16.51■□□□□ 0.23
DDR1-246ENST00000485023 GNSP15586 552 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 CYLC1P35663 651 aaPredicted RBP16.51■□□□□ 0.23
DDR1-246ENST00000485023 DPP6P42658 865 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 ID4P47928 161 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 HCAR3P49019 387 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 ZNF135P52742 658 aaPredicted RBP16.51■□□□□ 0.23
DDR1-246ENST00000485023 RHOAP61586 193 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 PPP2CBP62714 309 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 PPP2CAP67775 309 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 ARHGAP8P85298 464 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 DUOXA1Q1HG43 343 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 AGBL4Q5VU57 503 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 RHOT2Q8IXI1 618 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 OR2AP1Q8NGE2 309 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 OR2T34Q8NGX1 318 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 NETO1Q8TDF5 533 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 HEPHQ9BQS7 1158 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 GTPBP2Q9BX10 602 aaKnown RBP16.51■□□□□ 0.23
DDR1-246ENST00000485023 PDFQ9HBH1 243 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 DONSONQ9NYP3 566 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 PCDHA13Q9Y5I0 950 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 PTPRZ1P23471 2315 aaPredicted RBP16.51■□□□□ 0.23
DDR1-246ENST00000485023 CEP192Q8TEP8 1941 aa16.51■□□□□ 0.23
DDR1-246ENST00000485023 NUP205Q92621 2012 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TBC1D3DA0A087WVF3 549 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TBC1D3IA0A087WXS9 549 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TBC1D3EA0A087X179 549 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TBC1D3KA0A087X1G2 549 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TBC1D3FA6NER0 549 aaPredicted RBP16.5■□□□□ 0.23
DDR1-246ENST00000485023 TBC1D3LB9A6J9 549 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 PRAMEF11O60813 436 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 GSRP00390 522 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 IGHV4-34P06331 123 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TBC1D3HP0C7X1 549 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 ENGP17813 658 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 MAT2AP31153 395 aaKnown RBP16.5■□□□□ 0.23
DDR1-246ENST00000485023 MAN1A1P33908 653 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 HOXD12P35452 270 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 NOP2P46087 812 aaKnown RBP16.5■□□□□ 0.23
DDR1-246ENST00000485023 SNRPD1P62314 119 aaKnown RBP16.5■□□□□ 0.23
DDR1-246ENST00000485023 DPYSL3Q14195 570 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 AFMIDQ63HM1 303 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TBC1D3GQ6DHY5 549 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TBC1D3CQ6IPX1 549 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 SLC23A3Q6PIS1 610 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 LAYNQ6UX15 382 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 CCDC170Q8IYT3 715 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TBC1D3Q8IZP1 549 aaPredicted RBP16.5■□□□□ 0.23
DDR1-246ENST00000485023 KCTD6Q8NC69 237 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TMIEQ8NEW7 156 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 OR2I1PQ8NGU4 316 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 CEP76Q8TAP6 659 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 DNASE2BQ8WZ79 361 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 TSC1Q92574 1164 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 ISG20Q96AZ6 181 aaKnown RBP16.5■□□□□ 0.23
DDR1-246ENST00000485023 GDAP1L1Q96MZ0 367 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 ANP32EQ9BTT0 268 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 PCED1AQ9H1Q7 454 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 GOLPH3Q9H4A6 298 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 SUSD2Q9UGT4 822 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 EVLQ9UI08 416 aaPredicted RBP16.5■□□□□ 0.23
DDR1-246ENST00000485023 SLC6A14Q9UN76 642 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 RALGAPA1Q6GYQ0 2036 aa16.5■□□□□ 0.23
DDR1-246ENST00000485023 C4orf47A7E2U8 309 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 BCAT2O15382 392 aaPredicted RBP16.49■□□□□ 0.23
DDR1-246ENST00000485023 PLRG1O43660 514 aaKnown RBP16.49■□□□□ 0.23
DDR1-246ENST00000485023 MTA2O94776 668 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 MAP3K6O95382 1288 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 IGSF6O95976 241 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 UGT2B4P06133 528 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 SERPINF2P08697 491 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 KRT7P08729 469 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 KCNA4P22459 653 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 CDC25BP30305 580 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 ARSEP51690 589 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 CYTH1Q15438 398 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 PIP5KL1Q5T9C9 394 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 STPG1Q5TH74 334 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 RAD9BQ6WBX8 426 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 RABEPKQ7Z6M1 372 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 TMTC1Q8IUR5 882 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 PPP1R16AQ96I34 528 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 CAPN10Q9HC96 672 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 LHX3Q9UBR4 397 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 LCMT1Q9UIC8 334 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 INTUQ9ULD6 942 aa16.49■□□□□ 0.23
DDR1-246ENST00000485023 EPN1Q9Y6I3 576 aaPredicted RBP16.49■□□□□ 0.23
DDR1-246ENST00000485023 DMXL1Q9Y485 3027 aa16.48■□□□□ 0.23
DDR1-246ENST00000485023 NUMA1Q14980 2115 aa16.48■□□□□ 0.23
DDR1-246ENST00000485023 CHD5Q8TDI0 1954 aa16.48■□□□□ 0.23
DDR1-246ENST00000485023 CXorf51AA0A1B0GTR3 108 aa16.48■□□□□ 0.23
DDR1-246ENST00000485023 A0A1B0GTW7 788 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms