RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 HECAQ9UBI9 543 aaPredicted RBP16.3■□□□□ 0.2
ITGB1-210ENST00000474568 IP6K2Q9UHH9 426 aa16.3■□□□□ 0.2
ITGB1-210ENST00000474568 MFHAS1Q9Y4C4 1052 aa16.3■□□□□ 0.2
ITGB1-210ENST00000474568 AKR1B15C9JRZ8 316 aaPredicted RBP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 MYO1FO00160 1098 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 PLRG1O43660 514 aaKnown RBP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 OPHN1O60890 802 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 GEMIN4P57678 1058 aaKnown RBP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 YBEYP58557 167 aaPredicted RBP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 SERINC3Q13530 473 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 PIGHQ14442 188 aaPredicted RBP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 ASTE1Q2TB18 679 aaPredicted RBP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 PARP15Q460N3 678 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 PIP5KL1Q5T9C9 394 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 SARM1Q6SZW1 724 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 ADAT2Q7Z6V5 191 aaKnown RBP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 UMODL1-AS1Q8N2C9 162 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 DEFB124Q8NES8 71 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 TMIEQ8NEW7 156 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 CTNNBL1Q8WYA6 563 aaPredicted RBP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 KLK6Q92876 244 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 CCDC42Q96M95 316 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 SLC39A8Q9C0K1 460 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 NHEJ1Q9H9Q4 299 aaPredicted RBP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 AASDHPPTQ9NRN7 309 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 CWC15Q9P013 229 aaKnown RBP16.29■□□□□ 0.2
ITGB1-210ENST00000474568 CEP192Q8TEP8 1941 aa16.29■□□□□ 0.2
ITGB1-210ENST00000474568 DOCK4Q8N1I0 1966 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 A0A1W2PPC4 97 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 SSU72P8A0A1W2PR75 194 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 H3BRJ5 948 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 J3KR12 359 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 DFFAO00273 331 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 KRIT1O00522 736 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 KCNK3O14649 394 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 WNT9AO14904 365 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 GIPC1O14908 333 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 SLC7A4O43246 635 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 H2AFZP0C0S5 128 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 RARAP10276 462 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 AMPD1P23109 780 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 HTR7P34969 479 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 PAPOLAP51003 745 aaKnown RBP16.28■□□□□ 0.2
ITGB1-210ENST00000474568 NOVA1P51513 510 aaKnown RBP16.28■□□□□ 0.2
ITGB1-210ENST00000474568 AFF3P51826 1226 aaKnown RBP16.28■□□□□ 0.2
ITGB1-210ENST00000474568 TAS2R38P59533 333 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 RHOAP61586 193 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 TBX2Q13207 712 aaPredicted RBP16.28■□□□□ 0.2
ITGB1-210ENST00000474568 ACAP1Q15027 740 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 TEAD4Q15561 434 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 KIF19Q2TAC6 998 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 PSAPL1Q6NUJ1 521 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 H2AFVQ71UI9 128 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 ERN2Q76MJ5 926 aaKnown RBP16.28■□□□□ 0.2
ITGB1-210ENST00000474568 TP53INP2Q8IXH6 220 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 NPWQ8N729 165 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 FAM131CQ96AQ9 280 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 EXOC2Q96KP1 924 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 NCAPGQ9BPX3 1015 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 GAREM1Q9H706 876 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 LRRC19Q9H756 370 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 SNX11Q9Y5W9 270 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 LAMA1P25391 3075 aa16.28■□□□□ 0.2
ITGB1-210ENST00000474568 ZSCAN5CA6NGD5 496 aaPredicted RBP16.27■□□□□ 0.2
ITGB1-210ENST00000474568 EIF3CLB5ME19 914 aaKnown RBP16.27■□□□□ 0.2
ITGB1-210ENST00000474568 RNGTTO60942 597 aaKnown RBP16.27■□□□□ 0.2
ITGB1-210ENST00000474568 KCNK5O95279 499 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 UGT2B4P06133 528 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 ARL4AP40617 200 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 CCR5P51681 352 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 NDST2P52849 883 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 SNRPD1P62314 119 aaKnown RBP16.27■□□□□ 0.2
ITGB1-210ENST00000474568 SLC25A11Q02978 314 aaKnown RBP16.27■□□□□ 0.2
ITGB1-210ENST00000474568 DPYSQ14117 519 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 KRT81Q14533 505 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 MYLK3Q32MK0 819 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 BOLA3Q53S33 107 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 ARHGAP36Q6ZRI8 547 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 PARS2Q7L3T8 475 aaKnown RBP16.27■□□□□ 0.2
ITGB1-210ENST00000474568 GAS2L3Q86XJ1 694 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 PSTKQ8IV42 348 aaKnown RBP16.27■□□□□ 0.2
ITGB1-210ENST00000474568 CNGA4Q8IV77 575 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 ARHGAP12Q8IWW6 846 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 NIPA2Q8N8Q9 360 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 OR2AP1Q8NGE2 309 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 ISG20Q96AZ6 181 aaKnown RBP16.27■□□□□ 0.2
ITGB1-210ENST00000474568 PPP1R16AQ96I34 528 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 SERAC1Q96JX3 654 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 EIF3CQ99613 913 aaKnown RBP16.27■□□□□ 0.2
ITGB1-210ENST00000474568 MYOCQ99972 504 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 OSGEPQ9NPF4 335 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 ETNK2Q9NVF9 386 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 KLHL11Q9NVR0 708 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 UBA2Q9UBT2 640 aaPredicted RBP16.27■□□□□ 0.2
ITGB1-210ENST00000474568 CA5BQ9Y2D0 317 aa16.27■□□□□ 0.2
ITGB1-210ENST00000474568 A0A1W2PQU0 124 aa16.26■□□□□ 0.19
ITGB1-210ENST00000474568 ARHGAP42A6NI28 874 aa16.26■□□□□ 0.19
ITGB1-210ENST00000474568 INSIG1O15503 277 aa16.26■□□□□ 0.19
ITGB1-210ENST00000474568 PCDH8O95206 1070 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms