RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 VAV3Q9UKW4 847 aa10.9□□□□□ -0.66
CHMP2B-203ENST00000471660 VANGL2Q9ULK5 521 aa10.9□□□□□ -0.66
CHMP2B-203ENST00000471660 NOSIPQ9Y314 301 aaKnown RBP10.9□□□□□ -0.66
CHMP2B-203ENST00000471660 LOC100653049A0A140TA62 436 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 CCDC195A0A1B0GUA6 201 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 BET1O15155 118 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 MAN1A2O60476 641 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 KRT34O76011 436 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 KRT37O76014 449 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 LYPLA2O95372 231 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 KRT8P05787 483 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 RALBP11234 206 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 CRHR1P34998 444 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 RAD51Q06609 339 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 RALGDSQ12967 914 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 TKFCQ3LXA3 575 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 ZNF697Q5TEC3 545 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 ZNF746Q6NUN9 644 aaPredicted RBP10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 FKBP9P1Q75LS8 142 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 SLC26A11Q86WA9 606 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 PALM2Q8IXS6 379 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 METTL2AQ96IZ6 378 aaKnown RBP10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 GLT1D1Q96MS3 346 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 WDR18Q9BV38 432 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 HEMGNQ9BXL5 484 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 ZNF717Q9BY31 904 aaPredicted RBP10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 NUP50Q9UKX7 468 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 KIAA1024Q9UPX6 916 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 WBP11Q9Y2W2 641 aaKnown RBP10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 PCDHAC2Q9Y5I4 1007 aa10.9□□□□□ -0.67
CHMP2B-203ENST00000471660 IGLV3-22A0A075B6J6 115 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 GOLGA8IPA6NC78 632 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 USP17L15C9J2P7 530 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 USP17L13C9JLJ4 530 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 USP17L11C9JVI0 530 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 USP17L18D6R9N7 530 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 USP17L22D6RA61 530 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 USP17L17D6RBQ6 530 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 USP17L19D6RCP7 530 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 USP17L20D6RJB6 530 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 hCG_2039718K7EN88 272 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 NOP56O00567 594 aaKnown RBP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 BANF1O75531 89 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 PSMD10O75832 226 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 SLITRK3O94933 977 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 NADKO95544 446 aaPredicted RBP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 ITGAVP06756 1048 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 SNRPAP09012 282 aaKnown RBP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 ZSCAN5DPP0CG00 497 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 MBL2P11226 248 aaPredicted RBP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 BMP2P12643 396 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 BMP1P13497 986 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 IMPDH1P20839 514 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 PSMD8P48556 350 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 RAD23AP54725 363 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 MCCD1P59942 119 aaPredicted RBP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 PRKCEQ02156 737 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 USP17L24Q0WX57 530 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 ILF2Q12905 390 aaKnown RBP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 PEX6Q13608 980 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 COG2Q14746 738 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 SLC36A3Q495N2 470 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 MSS51Q4VC12 460 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 FNBP1LQ5T0N5 605 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 INTS11Q5TA45 600 aaKnown RBP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 FAXCQ5TGI0 409 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 MBLAC2Q68D91 279 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 USP17L6PQ6QN14 398 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 NAT8LQ8N9F0 302 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 CDKL2Q92772 493 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 NKD2Q969F2 451 aaPredicted RBP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 NRBF2Q96F24 287 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 MAGED4Q96JG8 741 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 ZNF560Q96MR9 790 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 BCL7BQ9BQE9 202 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 GON7Q9BXV9 100 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 WDR6Q9NNW5 1121 aaKnown RBP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 C8orf4Q9NR00 106 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 SMOXQ9NWM0 555 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 ANAPC7Q9UJX3 599 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 DNPEPQ9ULA0 475 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 UGT2A1Q9Y4X1 527 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 FAM25AB3EWG3 89 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 FAM25CB3EWG5 89 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 FAM25GB3EWG6 89 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 ERVH48-1M5A8F1 160 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 MEIS1O00470 390 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 RFPL1O75677 317 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 PRKACAP17612 351 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 RPL10P27635 214 aaKnown RBP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 NUDT2P50583 147 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 UBXN2AP68543 259 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 FMO1Q01740 532 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 RHDQ02161 417 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 VAC14Q08AM6 782 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 TARDBPQ13148 414 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 NAB1Q13506 487 aa10.89□□□□□ -0.67
CHMP2B-203ENST00000471660 CEP55Q53EZ4 464 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms