RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 USP10Q14694 798 aaKnown RBP13.18□□□□□ -0.3
PDZRN3-205ENST00000466780 MAMDC4Q6UXC1 1216 aa13.18□□□□□ -0.3
PDZRN3-205ENST00000466780 BNIPLQ7Z465 357 aa13.18□□□□□ -0.3
PDZRN3-205ENST00000466780 SLC2A14Q8TDB8 520 aa13.18□□□□□ -0.3
PDZRN3-205ENST00000466780 MAELQ96JY0 434 aaKnown RBP13.18□□□□□ -0.3
PDZRN3-205ENST00000466780 APBA2Q99767 749 aa13.18□□□□□ -0.3
PDZRN3-205ENST00000466780 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
PDZRN3-205ENST00000466780 THEGQ9P2T0 379 aa13.18□□□□□ -0.3
PDZRN3-205ENST00000466780 XPR1Q9UBH6 696 aa13.18□□□□□ -0.3
PDZRN3-205ENST00000466780 ARHGEF37A1IGU5 675 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 H0YJX3 145 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 PLOD2O00469 737 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 USP2O75604 605 aaPredicted RBP13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 H6PDO95479 791 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 TKTP29401 623 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 GRM5P41594 1212 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 PSMD8P48556 350 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 ZNF618Q5T7W0 954 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 LRRC8EQ6NSJ5 796 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 SLC41A1Q8IVJ1 513 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 PELI3Q8N2H9 469 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 RNF169Q8NCN4 708 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 LZICQ8WZA0 190 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 GPR78Q96P69 363 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 ANLNQ9NQW6 1124 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 OLAHQ9NV23 265 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 SUCOQ9UBS9 1254 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 H3BNH8 94 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 XPO1O14980 1071 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 PGK1P00558 417 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 ERCC2P18074 760 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 ACADSBP45954 432 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 CDK9P50750 372 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 ADIGQ0VDE8 80 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 ZBTB17Q13105 803 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 SYPL2Q5VXT5 272 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 DUS1LQ6P1R4 473 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 CRYBG2Q8N1P7 616 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 MYO1HQ8N1T3 1032 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 SPATA6LQ8N4H0 392 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 NPWQ8N729 165 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 TRIML2Q8N7C3 387 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 CCNYL1Q8N7R7 359 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 NT5C3BQ969T7 300 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 HSFY1Q96LI6 401 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 NPY6RQ99463 290 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 OMDQ99983 421 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 HAUS8Q9BT25 410 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 UNKQ9C0B0 810 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 RHOJQ9H4E5 214 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 UTP6Q9NYH9 597 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 ERAP1Q9NZ08 941 aa13.17□□□□□ -0.3
PDZRN3-205ENST00000466780 I6L893 689 aaPredicted RBP13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 M0QYT0 321 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 TRIM24O15164 1050 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 MAGEB3O15480 346 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 DAB1O75553 588 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 TXNP10599 105 aaKnown RBP13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 HDCP19113 662 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 NFKB1P19838 968 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 RHDQ02161 417 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 RALGDSQ12967 914 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 NME3Q13232 169 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 LPIN1Q14693 890 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 ZBTB6Q15916 424 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 Q3C1V9 767 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 MTX3Q5HYI7 312 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 HMBOX1Q6NT76 420 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 PIGZQ86VD9 579 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 ERI1Q8IV48 349 aaKnown RBP13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 MFSD6LQ8IWD5 586 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 RIN3Q8TB24 985 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 LPGAT1Q92604 370 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 OSBPL11Q9BXB4 747 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 GBA3Q9H227 469 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 CAAP1Q9H8G2 361 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 PIGVQ9NUD9 493 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 SNTG2Q9NY99 539 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 GPRC5DQ9NZD1 345 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 UBP1Q9NZI7 540 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 FBP2O00757 339 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 ZSCAN9O15535 394 aaPredicted RBP13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 AHSGP02765 367 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 HADHAP40939 763 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 NPY2RP49146 381 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 NDST2P52849 883 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 COG7P83436 770 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 SULT2A1Q06520 285 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 SLC12A1Q13621 1099 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 LRP8Q14114 963 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 DGKDQ16760 1214 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 ZNF484Q5JVG2 852 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 NOL9Q5SY16 702 aaKnown RBP13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 KLHL35Q6PF15 583 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 CEP97Q8IW35 865 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 NXNL1Q96CM4 212 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 TSNARE1Q96NA8 513 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 TMEM79Q9BSE2 394 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms