RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 PPM1HQ9ULR3 514 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ACTL7AQ9Y615 435 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 GOLGA6L9A6NEM1 432 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PPP1R12AO14974 1030 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 HRO43593 1189 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CST8O60676 142 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PRNPP04156 253 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 KRT10P13645 584 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 C5AR1P21730 350 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CHRNA3P32297 505 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 HSPA9P38646 679 aaKnown RBP11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PSMD8P48556 350 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 DNA2P51530 1060 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TPMTP51580 245 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RENBPP51606 427 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CCNHP51946 323 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 DYNLT1P63172 113 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 NHLH1Q02575 133 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RAD51Q06609 339 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ZNF33AQ06730 810 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 LBRQ14739 615 aaKnown RBP11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PDK1Q15118 436 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CYTH1Q15438 398 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 KAZNQ674X7 775 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SLC36A4Q6YBV0 504 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 USP30Q70CQ3 517 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CEP68Q76N32 757 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CACUL1Q86Y37 369 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TMIEQ8NEW7 156 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PPP1R16AQ96I34 528 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TSGA13Q96PP4 275 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PSKH2Q96QS6 385 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 HEPHQ9BQS7 1158 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CINPQ9BW66 212 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TM6SF2Q9BZW4 377 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PABPC3Q9H361 631 aaKnown RBP11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 HAUS2Q9NVX0 235 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 HECAQ9UBI9 543 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 FZD4Q9ULV1 537 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PACSIN2Q9UNF0 486 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CYP8B1Q9UNU6 501 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 NCKAP1Q9Y2A7 1128 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 HEY1Q9Y5J3 304 aa11.85□□□□□ -0.51
TRAF3IP1-204ENST00000462122 IGHV1OR15-9A0A0B4J2B8 117 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PROB1E7EW31 1015 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MATN3O15232 486 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MID1O15344 667 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MAP3K6O95382 1288 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 POP4O95707 220 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PEX11BO96011 259 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PYGMP11217 842 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CCNCP24863 283 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CD6P30203 668 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SLC8A1P32418 973 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MAPK8P45983 427 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PPIDQ08752 370 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 NSUN2Q08J23 767 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CCDC15Q0P6D6 951 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SLC10A2Q12908 348 aaPredicted RBP11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 HNRNPDQ14103 355 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SIM2Q14190 667 aaPredicted RBP11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ZNF235Q14590 738 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 GRM3Q14832 879 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RPS6KA1Q15418 735 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ELF2Q15723 593 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SPDYCQ5MJ68 293 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MEI1Q5TIA1 1274 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MARC1Q5VT66 337 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 BBS12Q6ZW61 710 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 REXO1L1PQ8IX06 675 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RYBPQ8N488 228 aaPredicted RBP11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CHST14Q8NCH0 376 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CCNYQ8ND76 341 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PIP4K2CQ8TBX8 421 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RLN3Q8WXF3 142 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 P3H4Q92791 437 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ZC3H10Q96K80 434 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 OLFM3Q96PB7 478 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 OMDQ99983 421 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 OSBPL1AQ9BXW6 950 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 OSBPL8Q9BZF1 889 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 DYRK4Q9NR20 520 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 FAM86C1Q9NVL1 165 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 LHX3Q9UBR4 397 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 AMACRQ9UHK6 382 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RAPGEFL1Q9UHV5 662 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RAB23Q9ULC3 237 aa11.84□□□□□ -0.51
TRAF3IP1-204ENST00000462122 APOC4-APOC2K7ER74 178 aa11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 SLC7A4O43246 635 aa11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 MAP3K13O43283 966 aa11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 LEFTY1O75610 366 aa11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 RNASEH2AO75792 299 aaKnown RBP11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 RHOBTB1O94844 696 aa11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 TJP3O95049 919 aa11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 APOC2P02655 101 aa11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 CTSLP07711 333 aa11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 MSNP26038 577 aaKnown RBP11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 MMP13P45452 471 aa11.83□□□□□ -0.52
TRAF3IP1-204ENST00000462122 CSNK1DP48730 415 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms