RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 WNT9AO14904 365 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 GIPC1O14908 333 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 DAPK3O43293 454 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 LATO43561 262 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 OPHN1O60890 802 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 CD59P13987 128 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 ERCC2P18074 760 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 KCNA4P22459 653 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 HCAR3P49019 387 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 CCNHP51946 323 aaPredicted RBP12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 PPP2CBP62714 309 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 RACK1P63244 317 aaKnown RBP12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 PPP2CAP67775 309 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 MAPK8IP2Q13387 824 aaPredicted RBP12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 TEAD4Q15561 434 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 SLC18A3Q16572 532 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 TSR1Q2NL82 804 aaKnown RBP12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 HLA-BQ31612 363 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 PARP15Q460N3 678 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 BOLA3Q53S33 107 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 KCNT1Q5JUK3 1230 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 LAYNQ6UX15 382 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 RFX8Q6ZV50 586 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 NIPA2Q8N8Q9 360 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 NETO2Q8NC67 525 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 VOPP1Q96AW1 172 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 CHP1Q99653 195 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 PACSIN1Q9BY11 444 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 TM6SF2Q9BZW4 377 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 SLC39A8Q9C0K1 460 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 LRRC19Q9H756 370 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 ZWILCHQ9H900 591 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 IL21RQ9HBE5 538 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 ABHD10Q9NUJ1 306 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 ZNHIT6Q9NWK9 470 aaKnown RBP12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 DONSONQ9NYP3 566 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 CWC15Q9P013 229 aaKnown RBP12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 IP6K2Q9UHH9 426 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 ANAPC7Q9UJX3 599 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 ANKRD6Q9Y2G4 727 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 SNX11Q9Y5W9 270 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 DNAH14Q0VDD8 3507 aa12.97□□□□□ -0.33
PRPF40A-203ENST00000448428 SSU72P8A0A1W2PR75 194 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 UPK3BL1B0FP48 263 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 UPK3BL2E5RIL1 263 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 MYO1FO00160 1098 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 MFAP3LO75121 409 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 TMCC1O94876 653 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 GSRP00390 522 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 TPM1P09493 284 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 RARAP10276 462 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 CSRP1P21291 193 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 MAT2AP31153 395 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 GKP32189 559 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 GRIA4P48058 902 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 NOVA1P51513 510 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 NDST2P52849 883 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 SNRPD1P62314 119 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 CCDC15Q0P6D6 951 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 TBX2Q13207 712 aaPredicted RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 KIF19Q2TAC6 998 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 SMTNL2Q2TAL5 461 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 MYLK3Q32MK0 819 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 ATXN7L2Q5T6C5 722 aaPredicted RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 N4BP2L1Q5TBK1 243 aaPredicted RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 AFMIDQ63HM1 303 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 TXNRD3NBQ6F5E7 133 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 PSAPL1Q6NUJ1 521 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 SARM1Q6SZW1 724 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 IL27RAQ6UWB1 636 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 ERN2Q76MJ5 926 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 PIP4P1Q86T03 277 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 PRPF39Q86UA1 669 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 RYBPQ8N488 228 aaPredicted RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 DEFB124Q8NES8 71 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 OR2AP1Q8NGE2 309 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 OR6K2Q8NGY2 324 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 HSPH1Q92598 858 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 CELF6Q96J87 481 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 SLC6A18Q96N87 628 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 HDAC8Q9BY41 377 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 TRIM5Q9C035 493 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 ZDHHC6Q9H6R6 413 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 GAREM1Q9H706 876 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 DYRK4Q9NR20 520 aa12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 TPX2Q9ULW0 747 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-203ENST00000448428 TRPM6Q9BX84 2022 aa12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 J3KR12 359 aa12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 KRIT1O00522 736 aa12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 KCNK3O14649 394 aa12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 AKR1B10O60218 316 aa12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 RNGTTO60942 597 aaKnown RBP12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 POP4O95707 220 aaKnown RBP12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 WNT1P04628 370 aa12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 ADRB1P08588 477 aa12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 CEACAM1P13688 526 aa12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 ITGB7P26010 798 aa12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 PAPOLAP51003 745 aaKnown RBP12.95□□□□□ -0.34
PRPF40A-203ENST00000448428 ZNF135P52742 658 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms