RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 LTB4R2Q9NPC1 389 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 SUN2Q9UH99 717 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 MUSKO15146 869 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 RNF40O75150 1001 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 ZNF821O75541 412 aaPredicted RBP17.68■□□□□ 0.42
SGCE-206ENST00000445866 GAS8O95995 478 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 CHRNB1P11230 501 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 HLA-EP13747 358 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 TARSP26639 723 aaKnown RBP17.68■□□□□ 0.42
SGCE-206ENST00000445866 IL12RB1P42701 662 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 MRPS25P82663 173 aaKnown RBP17.68■□□□□ 0.42
SGCE-206ENST00000445866 MRPS21P82921 87 aaKnown RBP17.68■□□□□ 0.42
SGCE-206ENST00000445866 DR1Q01658 176 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 PPP1R7Q15435 360 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 ARHGEF18Q6ZSZ5 1173 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 PGBD5Q8N414 524 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 FRS2Q8WU20 508 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 RTP4Q96DX8 246 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 SPATA13Q96N96 652 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 TM6SF2Q9BZW4 377 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 TMEM245Q9H330 911 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 MTG2Q9H4K7 406 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 ATP8A1Q9Y2Q0 1164 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 STON1Q9Y6Q2 735 aa17.68■□□□□ 0.42
SGCE-206ENST00000445866 TTC24A2A3L6 582 aaPredicted RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 OPHN1O60890 802 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 KLF8O95600 359 aaPredicted RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 KRT14P02533 472 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 HLA-DQB2P05538 268 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 NTSR1P30989 418 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 HSPA9P38646 679 aaKnown RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 PTGIRP43119 386 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 RECQLP46063 649 aaPredicted RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 SCNN1BP51168 640 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 MAXP61244 160 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 SIGLEC14Q08ET2 396 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 NSUN2Q08J23 767 aaKnown RBP eCLIP17.67■□□□□ 0.42
SGCE-206ENST00000445866 LRRC32Q14392 662 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 CARD16Q5EG05 197 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 ATXN7L2Q5T6C5 722 aaPredicted RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 TRMT11Q7Z4G4 463 aaKnown RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 ZNF687Q8N1G0 1237 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 RYBPQ8N488 228 aaPredicted RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 PCDH20Q8N6Y1 951 aaKnown RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 IL17RCQ8NAC3 791 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 GLIS1Q8NBF1 620 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 ZNF419Q96HQ0 510 aaPredicted RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 EXOC2Q96KP1 924 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 MFSD1Q9H3U5 465 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 GLOD4Q9HC38 313 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 LHX3Q9UBR4 397 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 F5H423 210 aaPredicted RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 EPHX1P07099 455 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 RPL22P35268 128 aaKnown RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 SNRPD1P62314 119 aaKnown RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 DHX34Q14147 1143 aaKnown RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 MYLK3Q32MK0 819 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 P3H1Q32P28 736 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 HNRNPA1L2Q32P51 320 aaKnown RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 C22orf39Q6P5X5 142 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 Q6ZVU0 165 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 SYNPOQ8N3V7 929 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 MMGT1Q8N4V1 131 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 TAB3Q8N5C8 712 aaPredicted RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 TXNDC5Q8NBS9 432 aaKnown RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 NOA1Q8NC60 698 aaKnown RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 FLCNQ8NFG4 579 aa17.67■□□□□ 0.42
SGCE-206ENST00000445866 POLR1EQ9GZS1 481 aaKnown RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 FARP1Q9Y4F1 1045 aaPredicted RBP17.67■□□□□ 0.42
SGCE-206ENST00000445866 HELZP42694 1942 aaKnown RBP17.66■□□□□ 0.42
SGCE-206ENST00000445866 EDDM13A0A1B0GTR0 161 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 TTI1O43156 1089 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 SYNCRIPO60506 623 aaKnown RBP17.66■□□□□ 0.42
SGCE-206ENST00000445866 ALADP13716 330 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 CES1P23141 567 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 PRKCHP24723 683 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 CD68P34810 354 aaPredicted RBP17.66■□□□□ 0.42
SGCE-206ENST00000445866 RGRP47804 291 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 VPS41P49754 854 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 PARP6Q2NL67 630 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 ITPRIPL1Q6GPH6 555 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 TRIM67Q6ZTA4 783 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 SYDE1Q6ZW31 735 aaPredicted RBP17.66■□□□□ 0.42
SGCE-206ENST00000445866 SRLQ86TD4 932 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 RPLP0P6Q8NHW5 317 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 PTPRN2Q92932 1015 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 SLCO2A1Q92959 643 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 SEMA3CQ99985 751 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 MGME1Q9BQP7 344 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 SLC25A51Q9H1U9 297 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 NOD2Q9HC29 1040 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 SCUBE2Q9NQ36 999 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 PAK5Q9P286 719 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 RSPH14Q9UHP6 348 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 SIT1Q9Y3P8 196 aa17.66■□□□□ 0.42
SGCE-206ENST00000445866 RAD51CO43502 376 aa17.65■□□□□ 0.42
SGCE-206ENST00000445866 POP4O95707 220 aaKnown RBP17.65■□□□□ 0.42
SGCE-206ENST00000445866 IGSF6O95976 241 aa17.65■□□□□ 0.42
SGCE-206ENST00000445866 NFKB1P19838 968 aa17.65■□□□□ 0.42
SGCE-206ENST00000445866 ADCY8P40145 1251 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms