RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ZNF135P52742 658 aaPredicted RBP24.08■■□□□ 1.45
VARS-217ENST00000440048 NDST2P52849 883 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 DPYSL2Q16555 572 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 AGBL4Q5VU57 503 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 TXNRD3NBQ6F5E7 133 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 GRIN3AQ8TCU5 1115 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 HSPH1Q92598 858 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 CELF6Q96J87 481 aaKnown RBP24.08■■□□□ 1.45
VARS-217ENST00000440048 TM6SF2Q9BZW4 377 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 WASF2Q9Y6W5 498 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 PLXNA2O75051 1894 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 ARHGAP33O14559 1287 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 SYPP08247 313 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 RARAP10276 462 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 CD27P26842 260 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 ZNF75DP51815 510 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 CCNHP51946 323 aaPredicted RBP24.07■■□□□ 1.44
VARS-217ENST00000440048 SLC25A11Q02978 314 aaKnown RBP24.07■■□□□ 1.44
VARS-217ENST00000440048 PLPP6Q8IY26 295 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 TC2NQ8N9U0 490 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 TEKT4Q8WW24 435 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 ARRDC3Q96B67 414 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 HEPHQ9BQS7 1158 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 ORAI3Q9BRQ5 295 aa24.07■■□□□ 1.44
VARS-217ENST00000440048 GTPBP2Q9BX10 602 aaKnown RBP24.07■■□□□ 1.44
VARS-217ENST00000440048 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.07■■□□□ 1.44
VARS-217ENST00000440048 HECAQ9UBI9 543 aaPredicted RBP24.07■■□□□ 1.44
VARS-217ENST00000440048 DOCK9Q9BZ29 2069 aa24.06■■□□□ 1.44
VARS-217ENST00000440048 H3BRJ5 948 aa24.06■■□□□ 1.44
VARS-217ENST00000440048 PLRG1O43660 514 aaKnown RBP24.06■■□□□ 1.44
VARS-217ENST00000440048 LEFTY1O75610 366 aa24.06■■□□□ 1.44
VARS-217ENST00000440048 TMCC1O94876 653 aa24.06■■□□□ 1.44
VARS-217ENST00000440048 TMEM253P0C7T8 217 aa24.06■■□□□ 1.44
VARS-217ENST00000440048 CCR5P51681 352 aa24.06■■□□□ 1.44
VARS-217ENST00000440048 DPYSQ14117 519 aa24.06■■□□□ 1.44
VARS-217ENST00000440048 SLC39A8Q9C0K1 460 aa24.06■■□□□ 1.44
VARS-217ENST00000440048 KDM4CQ9H3R0 1056 aa24.06■■□□□ 1.44
VARS-217ENST00000440048 TM9SF3Q9HD45 589 aa24.06■■□□□ 1.44
VARS-217ENST00000440048 TBC1D3DA0A087WVF3 549 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 TBC1D3IA0A087WXS9 549 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 TBC1D3EA0A087X179 549 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 TBC1D3KA0A087X1G2 549 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 TBC1D3FA6NER0 549 aaPredicted RBP24.05■■□□□ 1.44
VARS-217ENST00000440048 TBC1D3LB9A6J9 549 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 PROSCO94903 275 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 GSRP00390 522 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 TBC1D3HP0C7X1 549 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 ARL4AP40617 200 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 ATXN3P54252 364 aaPredicted RBP24.05■■□□□ 1.44
VARS-217ENST00000440048 GRIK2Q13002 908 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 INO80DQ53TQ3 878 aaPredicted RBP24.05■■□□□ 1.44
VARS-217ENST00000440048 PIP5KL1Q5T9C9 394 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 AFMIDQ63HM1 303 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 TBC1D3GQ6DHY5 549 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 TBC1D3CQ6IPX1 549 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 POLNQ7Z5Q5 900 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 CPNE8Q86YQ8 564 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 ARHGAP12Q8IWW6 846 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 TBC1D3Q8IZP1 549 aaPredicted RBP24.05■■□□□ 1.44
VARS-217ENST00000440048 RYBPQ8N488 228 aaPredicted RBP24.05■■□□□ 1.44
VARS-217ENST00000440048 CASKIN2Q8WXE0 1202 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 MRFAP1L1Q96HT8 127 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 EBF2Q9HAK2 575 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 OSGEPQ9NPF4 335 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 DYRK4Q9NR20 520 aa24.05■■□□□ 1.44
VARS-217ENST00000440048 A0A1W2PPC4 97 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 ARHGAP42A6NI28 874 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 SSR1P43307 286 aaKnown RBP24.04■■□□□ 1.44
VARS-217ENST00000440048 PAPOLAP51003 745 aaKnown RBP24.04■■□□□ 1.44
VARS-217ENST00000440048 AFF3P51826 1226 aaKnown RBP24.04■■□□□ 1.44
VARS-217ENST00000440048 TAS2R38P59533 333 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 SNRPD1P62314 119 aaKnown RBP24.04■■□□□ 1.44
VARS-217ENST00000440048 PPP2CBP62714 309 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 PPP2CAP67775 309 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 UAP1L1Q3KQV9 507 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 NPWQ8N729 165 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 NETO2Q8NC67 525 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 OR2AP1Q8NGE2 309 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 OR2I1PQ8NGU4 316 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 OR6K2Q8NGY2 324 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 ZDHHC6Q9H6R6 413 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 PDFQ9HBH1 243 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 PCDH18Q9HCL0 1135 aa24.04■■□□□ 1.44
VARS-217ENST00000440048 J3KR12 359 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 PRAMEF11O60813 436 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 AMPD1P23109 780 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 GKP32189 559 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 CSNK1EP49674 416 aaKnown RBP24.03■■□□□ 1.44
VARS-217ENST00000440048 BNC1Q01954 994 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 HADHQ16836 314 aaKnown RBP24.03■■□□□ 1.44
VARS-217ENST00000440048 MYLK3Q32MK0 819 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 PPM1JQ5JR12 505 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 ATXN7L2Q5T6C5 722 aaPredicted RBP24.03■■□□□ 1.44
VARS-217ENST00000440048 ERN2Q76MJ5 926 aaKnown RBP24.03■■□□□ 1.44
VARS-217ENST00000440048 MINDY1Q8N5J2 469 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 PPP1R16AQ96I34 528 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 CSPG4P5Q96PW8 444 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 HDAC8Q9BY41 377 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 ZDHHC5Q9C0B5 715 aa24.03■■□□□ 1.44
VARS-217ENST00000440048 UBA2Q9UBT2 640 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms