RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 TBC1D3CQ6IPX1 549 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 SLC23A3Q6PIS1 610 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 NCEH1Q6PIU2 408 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 RHOT2Q8IXI1 618 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 CCDC170Q8IYT3 715 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 TBC1D3Q8IZP1 549 aaPredicted RBP16.8■□□□□ 0.28
TOM1-207ENST00000439512 GRIN3AQ8TCU5 1115 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 BIRC7Q96CA5 298 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 CSPG4P5Q96PW8 444 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 HEPHQ9BQS7 1158 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 FSCN3Q9NQT6 498 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 IL36AQ9UHA7 158 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 EVLQ9UI08 416 aaPredicted RBP16.8■□□□□ 0.28
TOM1-207ENST00000439512 LCMT1Q9UIC8 334 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 CDV3Q9UKY7 258 aaKnown RBP16.8■□□□□ 0.28
TOM1-207ENST00000439512 INTUQ9ULD6 942 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 SLC6A14Q9UN76 642 aa16.8■□□□□ 0.28
TOM1-207ENST00000439512 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.8■□□□□ 0.28
TOM1-207ENST00000439512 LNP1A1A4G5 178 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 DFFAO00273 331 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 LEFTY1O75610 366 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 TMCC1O94876 653 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 SERPINF2P08697 491 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 SDHBP21912 280 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 ADPRHP54922 357 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 SNRPD1P62314 119 aaKnown RBP16.79■□□□□ 0.28
TOM1-207ENST00000439512 MMRN1Q13201 1228 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 SPA17Q15506 151 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 INO80DQ53TQ3 878 aaPredicted RBP16.79■□□□□ 0.28
TOM1-207ENST00000439512 AFMIDQ63HM1 303 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 RABEPKQ7Z6M1 372 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 ARHGAP12Q8IWW6 846 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 PLPP6Q8IY26 295 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 ZCCHC9Q8N567 271 aaKnown RBP16.79■□□□□ 0.28
TOM1-207ENST00000439512 LZTR1Q8N653 840 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 NPWQ8N729 165 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 KCTD6Q8NC69 237 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 OR2T34Q8NGX1 318 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 OR6K2Q8NGY2 324 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 NETO1Q8TDF5 533 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 RFFLQ8WZ73 363 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 FAM131CQ96AQ9 280 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 ARRDC3Q96B67 414 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 DYRK4Q9NR20 520 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 ETNK2Q9NVF9 386 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 UBA2Q9UBT2 640 aaPredicted RBP16.79■□□□□ 0.28
TOM1-207ENST00000439512 SUSD2Q9UGT4 822 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 MFHAS1Q9Y4C4 1052 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 WASF2Q9Y6W5 498 aa16.79■□□□□ 0.28
TOM1-207ENST00000439512 A0A1B0GTW7 788 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 KRIT1O00522 736 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 BCAT2O15382 392 aaPredicted RBP16.78■□□□□ 0.28
TOM1-207ENST00000439512 POP4O95707 220 aaKnown RBP16.78■□□□□ 0.28
TOM1-207ENST00000439512 CD48P09326 243 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 IL4RP24394 825 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 GKP32189 559 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 CYLC1P35663 651 aaPredicted RBP16.78■□□□□ 0.28
TOM1-207ENST00000439512 ARHGAP25P42331 645 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 NOP2P46087 812 aaKnown RBP16.78■□□□□ 0.28
TOM1-207ENST00000439512 CYTH1Q15438 398 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 MYLK3Q32MK0 819 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 ZFYVE27Q5T4F4 411 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 ATXN7L2Q5T6C5 722 aaPredicted RBP16.78■□□□□ 0.28
TOM1-207ENST00000439512 STPG1Q5TH74 334 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 TMCO3Q6UWJ1 677 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 TMTC1Q8IUR5 882 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 TP53INP2Q8IXH6 220 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 SPC24Q8NBT2 197 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 OR2AP1Q8NGE2 309 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 CASKIN2Q8WXE0 1202 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 EDEM2Q9BV94 578 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 ZDHHC6Q9H6R6 413 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 CAPN10Q9HC96 672 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 TFR2Q9UP52 801 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 PCDHA13Q9Y5I0 950 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 EPN1Q9Y6I3 576 aaPredicted RBP16.78■□□□□ 0.28
TOM1-207ENST00000439512 CACNA1AO00555 2505 aa16.78■□□□□ 0.28
TOM1-207ENST00000439512 SOWAHDA6NJG2 315 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 C4orf47A7E2U8 309 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 SLC7A4O43246 635 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 PRAMEF11O60813 436 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 MTA2O94776 668 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 LCA5LO95447 670 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 GSRP00390 522 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 IGHV4-34P06331 123 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 KRT7P08729 469 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 ENGP17813 658 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 CD27P26842 260 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 MAN1A1P33908 653 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 MAPK8P45983 427 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 ARSEP51690 589 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 LIMK1P53667 647 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 RHOAP61586 193 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 CCDC15Q0P6D6 951 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 PUM1Q14671 1186 aaKnown RBP eCLIP16.77■□□□□ 0.28
TOM1-207ENST00000439512 AGBL4Q5VU57 503 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 ARHGAP36Q6ZRI8 547 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 ERN2Q76MJ5 926 aaKnown RBP16.77■□□□□ 0.28
TOM1-207ENST00000439512 C1orf216Q8TAB5 229 aa16.77■□□□□ 0.28
TOM1-207ENST00000439512 TSC1Q92574 1164 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms