RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 POU2F3Q9UKI9 436 aa5.44□□□□□ -1.54
PTPN4-203ENST00000430976 ERGIC3Q9Y282 383 aa5.44□□□□□ -1.54
PTPN4-203ENST00000430976 GPR55Q9Y2T6 319 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-203ENST00000430976 ATXN7O15265 892 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 TCAPO15273 167 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 ADAM23O75077 832 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 HTR3BO95264 441 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 ALDH1A1P00352 501 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 AGTP01019 485 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 NQO1P15559 274 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 DGKAP23743 735 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 SHMT1P34896 483 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 RGS2P41220 211 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 DNM2P50570 870 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MAT1AQ00266 395 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 SMAD2Q15796 467 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 KIZQ2M2Z5 673 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 DNAL1Q4LDG9 190 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 FAM47AQ5JRC9 791 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 IL23RQ5VWK5 629 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 INTS5Q6P9B9 1019 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 C16orf62Q7Z3J2 963 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 RBM23Q86U06 439 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 IQCHQ86VS3 1027 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 PTRH1Q86Y79 214 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MCATQ8IVS2 390 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 KLHL7Q8IXQ5 586 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 NR4A3Q92570 626 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 CYFIP2Q96F07 1278 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 OR1F2PQ96R84 312 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 SMOQ99835 787 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MCMBPQ9BTE3 642 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 NTMT1Q9BV86 223 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MMP27Q9H306 513 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 JMJD4Q9H9V9 463 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 CREBZFQ9NS37 354 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 SACM1LQ9NTJ5 587 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 GULP1Q9UBP9 304 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 CHORDC1Q9UHD1 332 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 DLGAP4Q9Y2H0 992 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 TCP11X1B4DZS4 312 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 F8W036 122 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 TLX3O43711 291 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 TUBB4AP04350 444 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 SLC2A1P11166 492 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 HK1P19367 917 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 ATP6V1B2P21281 511 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 TGM1P22735 817 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 F8A1P23610 371 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 LCN1P31025 176 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 NPY2RP49146 381 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 ALDH7A1P49419 539 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 COPZ1P61923 177 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 FLI1Q01543 452 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF33AQ06730 810 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 TEFQ10587 303 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 THOC5Q13769 683 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 DDX39BQ13838 428 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MED22Q15528 200 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 TBCCQ15814 346 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 FSCN1Q16658 493 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 LIN52Q52LA3 116 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 CHSY3Q70JA7 882 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 PXKQ7Z7A4 578 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 FJX1Q86VR8 437 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MCEMP1Q8IX19 187 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 CLIP4Q8N3C7 705 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MLKLQ8NB16 471 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 AZIN2Q96A70 460 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 BSCL2Q96G97 398 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MKRN2Q9H000 416 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 EPN3Q9H201 632 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 OR10A4Q9H209 315 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 KCNH6Q9H252 994 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 PLGRKTQ9HBL7 147 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 C1orf112Q9NSG2 853 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 ASNSD1Q9NWL6 643 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 SMPD3Q9NY59 655 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 RPAP1Q9BWH6 1393 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 A0A1B0GTQ1 180 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 I3L521 148 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MAFO75444 373 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 JRKO75564 520 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 ENDOD1O94919 500 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 JMJD7P0C870 316 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 PKMP14618 531 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MAP3K8P41279 467 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 DNA2P51530 1060 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 TNFRSF17Q02223 184 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 ORC2Q13416 577 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 KYNUQ16719 465 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 ZIK1Q3SY52 487 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 RARS2Q5T160 578 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MEDAGQ5VYS4 303 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 WDR49Q8IV35 697 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 CAMKVQ8NCB2 501 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 OR4A15Q8NGL6 344 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 OR52N1Q8NH53 320 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 RAET1EQ8TD07 263 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MCOLN3Q8TDD5 553 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms